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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7uarA_

Fold library idPDB HeaderMoleculeTitle
c7uarA_3.50PDB header: viral proteinChain: A: PDB Molecule: spike glycoprotein;


Added to library: Wed Jun 22 02:53:57 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHFDNPVLPFNDGVYFASTNIIRGWIFGTTLD
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Known secondary structure (DSSP)


TT


SSS



S

B

TT







TT



SS
T
 .........80.........90.........100.........110.........120.........130.........140
Sequence SKTQSLLIVNNATNVVIKVCEFQFCNDPFLGEFRVYSSANNCTFEYVSQPFLKNLREFVFKNIDGYFKIY
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Known secondary structure (DSSP) TSS


SS







SS

B


STT
S

S








TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence SKHTPINLVRDLPQGFSALEPLVDLPIGINITRFQTLLALHRGAAAYYVGYLQPRTFLLKYNENGTITDA
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Known secondary structure (DSSP)
S
SSS

S









B







B


TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence VDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRI
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Known secondary structure (DSSP) TTSSTSSS

S










B

TTTTSS
SS

BGGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence SNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDD
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Known secondary structure (DSSP)
SSB



TT
SSSS
TTSTTT
SGGGGGGSSTT

SS



SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence FTGCVIAWNSNNLDSYNYLYRPLQSYGFQPTVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNF
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Known secondary structure (DSSP)







B




B
S
S





SSSSS











SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence NFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVL
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Known secondary structure (DSSP) TT





TT

TTT
TTT






TTT



 .........500.........510.........520.........530.........540.........550.........560
Sequence YQDVNCTEVSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICAVASQSIIAYTMSLGAENSVAYSNNSIAI
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Known secondary structure (DSSP) TTS
TT



TTS

SS
B


STT

BTTB
B










SS
 .........570.........580.........590.........600.........610.........620.........630
Sequence PTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQ
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Known secondary structure (DSSP) S






T
S
GGGTT

 .........640.........650.........660.........670.........680.........690.........700
Sequence VKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSPIEDLLFNKVTLQKFNGLTVLPPLLTDEMIAQYTSALL
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Known secondary structure (DSSP)
SS




SS

STT


TTTS

TTSTT


TT




SSS


SS
 .........710.........720.........730.........740.........750.........760.........770
Sequence AGTITSGWTFGAGPALQIPFPMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTPSALGKL
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Known secondary structure (DSSP) TTSS




TTT

TT
TTTT
 .........780.........790.........800.........810.........820.........830.........840
Sequence QDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEI
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Known secondary structure (DSSP) GGG

TTSS
S
S
 .........850.........860.........870.........880.........890.........900.........910
Sequence RASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAH
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Known secondary structure (DSSP) TSS


STBTTBSSTT

B

S
TT
 .........920.........930.........940.........950.........960........
Sequence FPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQPELD
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Known secondary structure (DSSP) SSSSSS

TTS


B

BTTTTTTSSS



B
T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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