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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7u5eJ_

Fold library idPDB HeaderMoleculeTitle
c7u5eJ_4.03PDB header: dna binding protein/dna/rnaChain: J: PDB Molecule: tniq;


Added to library: Sat Jun 17 13:17:51 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VRPEPFADEALESYFLRLSQENGFERYRIFSGSVQDWLHTTDHAAAGAFPLELSRLNIFHASRSSGLRVR
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Known secondary structure (DSSP)





SSB
TTT

STTT
TT

SSGGG
SGGG
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence ALQLVDRLTDGAPFRLLQLALCHSAISFGNHYKAVHRSGVDIPLSFIRVHQIPCCPDCLRESAYVRQCWH
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Known secondary structure (DSSP) SS


S
GGGGS

GGGTTSS

TTGGGB

S




TTS


BGGGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence FKPYVGCHRHGGRLIYSCPACGESLNYLASESINHCQCGFDLRTAPDEIQLSALAYGCSFESSNPLLAIG
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Known secondary structure (DSSP) BTT

S
SSSS

S

S

BTTB


TTTTT
SSB
TT

BTT


TTTGGGT





SSS



 .........220.........230.........240.........250.........260.........270.........280
Sequence SLSARFGALYWYQQRYLSDHEAVRDDRALTKAIGHFTAWPDAFWRELQQMVDDALVRQTKPLNHTDFVDV
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Known secondary structure (DSSP)
T


SS


SSTTTST

S
GGGSB
 .........290.........300.........310.........320.........330.........340.........350
Sequence FGSVVADCRQIPMRNTGQNFILKNLIGFLTDLVARHPQCRVANVGDLLLSAVDAATLLSTSVEQVRRLHH
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Known secondary structure (DSSP) TTTTGGGGSSS

STTT
TS


SS

TT


TTS
 .........360.........370....
Sequence EGFLPLSIVFHLRHVVELRQARMQ
Predicted secondary structure



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Known secondary structure (DSSP) TTSS







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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