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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7tmrD_

Fold library idPDB HeaderMoleculeTitle
c7tmrD_3.50PDB header: membrane proteinChain: D: PDB Molecule: vacuolar proton pump subunit b;


Added to library: Wed Jun 22 01:43:17 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KAVEQGFNVKPRLNYNTVSGVNGPLVILEKVKFPRYNEIVNLTLPDGTVRQGQVLEIRGDRAIVQVFEGT
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Known secondary structure (DSSP)

GGGG







TT


SS

SS
TT

TTTT
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence SGIDVKKTTVEFTGESLRIPVSEDMLGRIFDGSGRPIDNGPKVFAEDYLDINGSPINPYARIYPEEMIST
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Known secondary structure (DSSP) TT

SSS


GGGTT
TTS
B
SS





STT




GGGB






 .........150.........160.........170.........180.........190.........200.........210
Sequence GVSAIDTMNSIARGQKIPIFSASGLPHNEIAAQICRQAGLVRPTKDVHDGHEENFSIVFAAMGVNLETAR
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Known secondary structure (DSSP) S
TTS
TT
B


TTS


BSS
SSBTTBSS

S

 .........220.........230.........240.........250.........260.........270.........280
Sequence FFKQDFEENGSLERTSLFLNLANDPTIERIITPRLALTTAEYLAYQTERHVLTILTDMSSYADALREVSA
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Known secondary structure (DSSP) TGGGGTTS
SGGGGTTS

S
 .........290.........300.........310.........320.........330.........340.........350
Sequence AREEVPGRRGYPGYMYTDLSTIYERAGRVEGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQIFVDRQ
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Known secondary structure (DSSP) TT

TTTTS
S
BTT
S

TTS
TTSSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence LHNKGIYPPINVLPSLSRLMKSAIGEGMTRKDHGDVSNQLYAKYAIGKDAAAMKAVVGEEALSIEDKLSL
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Known secondary structure (DSSP) TT
SS
TT
TTSSBTTBS
TTS
STTS
 .........430.........440.........450.........460.........470.....
Sequence EFLEKFEKTFITQGAYEDRTVFESLDQAWSLLRIYPKEMLNRISPKILDEFYDRA
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Known secondary structure (DSSP) TT


TT



TTS
GGG
TTS
TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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