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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7tj9A_

Fold library idPDB HeaderMoleculeTitle
c7tj9A_2.90PDB header: transport proteinChain: A: PDB Molecule: sodium channel protein type 7 subunit alpha;


Added to library: Wed Jun 22 02:59:29 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence CTLSPFNCIRRTTIKVLVHPFFQLFILISVLIDCVFMSLTNLPKWRPVLENTLLGIYTFEILVKLFARGV
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Known secondary structure (DSSP)



SS
TSTT



S

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence WAGSFSFLGDPWNWLDFSVTVFEVIIRYSPLDFIPTLQTARTLRILKIIPLNQGLKSLVGVLIHCLKQLI
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Known secondary structure (DSSP)
SSSSSTTTSTSS


GGGGGGTTTST
 .........150.........160.........170.........180.........190.........200.........210
Sequence GVIILTLFFLSIFSLIGMGLFMGNLKHKCFRWPQTGNPYYIRETENFYYLEGERYALLCGNRTDAGQCPE
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Known secondary structure (DSSP) TTGGGS




TTS


TTTB


SS
SS




SSTTS



T
 .........220.........230.........240.........250.........260.........270.........280
Sequence GYVCVKAGINPDQGFTNFDSFGWALFALFRLMAQDYPEVLYHQILYASGKVYMIFFVVVSFLFSFYMASL
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Known secondary structure (DSSP) T
S

SGGGTS

SBTTTT
SS
GGGTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence FLGILAMAYEEEKQRVMAPFTDLFLIICIILNVCFLTLEHYPMSKQTNTLLNIGNLVFIGIFTAEMIFKI
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Known secondary structure (DSSP)


TT
T

SS

S
 .........360.........370.........380.........390.........400.........410.........420
Sequence IAMHPYGYFQVGWNIFDSMIVFHGLIELCLANVAGMALLRLFRMLRIFKLGKYWPTFQILMWSLSNSWVA
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Known secondary structure (DSSP) S
TTSTTSSTT


TTGGGGGGGGGGGGGG
 .........430.........440.........450.........460.........470.........480.........490
Sequence LKDLVLLLFTFIFFSAAFGMKLFGKNYEEFVCHIDKDCQLPRWHMHDFFHSFLNVFRILCGEWVETLWDC
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Known secondary structure (DSSP) TGGGS
TTS


SS

SSTS

S
 .........500.........510.........520.........530.........540.........550.........560
Sequence MEVAGQSWCIPFYLMVILIGNLLVLYLFLALVSSFSSQNIRKTCCKIVENNWFKCFIGLVTLLSTGTLAF
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Known secondary structure (DSSP) T


SGGGG
 .........570.........580.........590.........600.........610.........620.........630
Sequence EDIYMDQRKTIKILLEYADMIFTYIFILEMLLKWMAYGFKAYFSNGWYRLDFVVVIVFCLSLIGKTREEL
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Known secondary structure (DSSP)
STTTTT

TSTTS
TTT
 .........640.........650.........660.........670.........680.........690.........700
Sequence KPLISMKFLRPLRVLSQFERMKVVVRALIKTTLPTLNVFLVCLMIWLIFSIMGVDLFAGRFYECIDPTSG
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Known secondary structure (DSSP) GGGGGGGGGGGG
STTTT



TTT
 .........710.........720.........730.........740.........750.........760.........770
Sequence ERFPSSEVMNKSRCESLLFNESMLWENAKMNFDNVGNGFLSLLQVATFNGWITIMNSAIDSVAVNIQPHF
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Known secondary structure (DSSP)
B

TTT

B

SS





SS

SSTTSSTT

SSSB


T
 .........780.........790.........800.........810.........820.........830.........840
Sequence EVNIYMYCYFINFIIFGVFLPLSMLITVIIDNFNKHKIKLGGSNIFITVKQRKQYRRLKKLMYEDSQRPV
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Known secondary structure (DSSP) TSSGGGTTT
S
SSS
TTS





 .........850.........860.........870.........880.........890.........900.........910
Sequence PRPLNKLQGFIFDVVTSQAFNVIVMVLICFQAIAMMIDTDVQSLQMSIALYWINSIFVMLYTMECILKLI
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Known secondary structure (DSSP)



SS
SS

STT
BSS

 .........920.........930.........940.........950.........960.........970.........980
Sequence AFRCFYFTIAWNIFDFMVVIFSITGLCLPMTVGSYLVPPSLVQLILLSRIIHMLRLGKGPKVFHNLMLPL
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Known secondary structure (DSSP) STTTTTTST

S


TTGGGGGGGSSSSS
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence MLSLPALLNIILLIFLVMFIYAVFGMYNFAYVKKEAGINDVSNFETFGNSMLCLFQVAIFAGWDGMLDAI
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Known secondary structure (DSSP) TT



TT

SSSSSSSTTSS
 .........1060.........1070.........1080.........1090.........1100.........1110.
Sequence FNSKWSDCDPDKINPGTQVRGDCGNPSVGIFYFVSYILISWLIIVNMYIVVVMEFLNIASK
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Known secondary structure (DSSP) GGGTTT


TT
B
TTSS
B




T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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