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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7tf2B_

Fold library idPDB HeaderMoleculeTitle
c7tf2B_3.62PDB header: viral proteinChain: B: PDB Molecule: spike glycoprotein;


Added to library: 3.62
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHKRFDNPVLPFNDGV
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TT


B
SSS



S


TT







TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence YFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYSEFRVYSSANNCTFE
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Known secondary structure (DSSP) SS



SS
STTS

SS


 .........150.........160.........170.........180.........190.........200.........210
Sequence YVSQPFLNFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPLVDLPIGINITRFQTLLALHRS
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Known secondary structure (DSSP)






TT


SSS






B







 .........220.........230.........240.........250.........260.........270.........280
Sequence GWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESI
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SSS
TTT
T
S


S


S
 .........290.........300.........310.........320.........330.........340.........350
Sequence VRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVY
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Known secondary structure (DSSP)




SB


T
SS


GGG

SSB



S
SS
SGGGGT
S
 .........360.........370.........380.........390.........400.........410.........420
Sequence ADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYRYRLFRKSNLKPFER
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Known secondary structure (DSSP)
GGGSTTSSTT

ST



SS




TT
B





SS


TT

 .........430.........440.........450.........460.........470.........480.........490
Sequence DISTEIYQAGSTPCNGVIGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKN
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Known secondary structure (DSSP)






SSS

TTS
BTT
S

B
TTS
STT



SSS



S







S
 .........500.........510.........520.........530.........540.........550.........560
Sequence KCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSN
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Known secondary structure (DSSP) STT





TT

B


TTS



TTT






TTT

 .........570.........580.........590.........600.........610.........620.........630
Sequence QVAVLYQGVNCTEVNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQSIIAYTMSLGAENSVAYSNNS
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Known secondary structure (DSSP)

T

GGG


SSS

S

B

STT

B










TT
 .........640.........650.........660.........670.........680.........690.........700
Sequence IAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEV
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Known secondary structure (DSSP)




TT
GGG
S
 .........710.........720.........730.........740.........750.........760.........770
Sequence FAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSPIEDLLFNKVTNGLTVLPPLLTDEMIAQYTSALLA
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Known secondary structure (DSSP)


SS




SS

STT


TTTS

TTSTT








SS
 .........780.........790.........800.........810.........820.........830.........840
Sequence GTITSGWTFGAGPALQIPFPMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTPSALGKLQ
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Known secondary structure (DSSP) STTSTTTSS




TT

T
TTTT
 .........850.........860.........870.........880........
Sequence DVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEc7tf2B_
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Known secondary structure (DSSP) GGG

TTSS
S
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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