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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7tbzA_

Fold library idPDB HeaderMoleculeTitle
c7tbzA_4.30PDB header: transport proteinChain: A: PDB Molecule: atp-binding cassette, sub-family a (abc1), member 1;


Added to library: Sat Jan 29 11:59:42 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence CWPQLRLLLWKNLTFRRRQTCQLLLEVAWPLFIFLILISVRLSYPPYEQHECHFPNKAMPSAGTLPWVQG
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Known secondary structure (DSSP)

SSTS










GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence IICNANNPCFRYPTPGEAPGVVGNFNKSIVARLFSDARRLLLYSQKDTSMKDMRKVLRTLQQPSKELAEA
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Known secondary structure (DSSP) TS
S



SS

GGGSSS




SS
SS




S
 .........150.........160.........170.........180.........190.........200.........210
Sequence TKTLLHSLGTLAQELFSMRSWSDMRQEVMFLTSSTQIYQAVSRIVCGHPFYDNSTTPYCNDLMKNLESSP
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Known secondary structure (DSSP) SS

S

S



GGGTS
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence LSRIIWKALKPLLVGKILYTPDTPATRQVMAEVNKTFQELAVFHDLEGMWEELSPKIWTFMENSQEMDLV
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Known secondary structure (DSSP) S
TTS

SS

TTGGGTSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence RMLLDSRDNDHFWEQQLDGLDWTAQDIVAFLAKHPVCTWREAFNETNQAIRTISRFMECVNLNKLEPIAT
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Known secondary structure (DSSP) SSSSTT
SS
S





T





SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence EVWLINKSMELLDERKFWAGIVFTGITPGSIELPHHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFED
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Known secondary structure (DSSP) STT






SSS
S



S

GGGS

SS
SS
SS


S



TTTS
 .........430.........440.........450.........460.........470.........480.........490
Sequence MRYVWGGFAYLQDVVEQAIIRVLTGTEKKTGVYMQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVI
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Known secondary structure (DSSP)
TST












S
 .........500.........510.........520.........530.........540.........550.........560
Sequence IKGIVYEKEARLKETMRIMGLDNSILWFSWFISSLIPLLVSAGLLVVILKLGNLLPYSDPSVVFVFLSVF
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Known secondary structure (DSSP) TTTT

TTSSTT

 .........570.........580.........590.........600.........610.........620.........630
Sequence AVVTILQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWRDYVGFTLKIFASLLSPVAFGFGCEYFA
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Known secondary structure (DSSP) TT


TGGG

TTS
 .........640.........650.........660.........670.........680.........690.........700
Sequence LFEEQGIGVQWDNNLTTSVSMMLFDTFLYGVMTWYIEAVFPGQYGIPRCMEEEPTHLKLGVSIQNLVKVY
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Known secondary structure (DSSP) TTSS


S


S

SSS



B



TTS
S




 .........710.........720.........730.........740.........750.........760.........770
Sequence LALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYILGKDIRSEMSTIRQNLGVCPQHNVLFDML
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Known secondary structure (DSSP)


SSS

B

SSSSSSTTSS

SS
TS
BTTT
STTTGGGB

B
SS



TT
 .........780.........790.........800.........810.........820.........830.........840
Sequence TVEEHIWFYARLKGLSEKHVKAEMEQMALDVGLPSSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDE
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Known secondary structure (DSSP)
T

S

SSS
S
S
TTTT

SBB
S
 .........850.........860.........870.........880.........890.........900.........910
Sequence PTAGVDPYSRRGIWELLLKYRQGRTIILSTHHMDEADVLGDRIAIISHGKLCCVGSSLFLKNQLGTGYYL
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Known secondary structure (DSSP)
SSS

TT
SS



S

SBTT
SS

 .........920.........930.........940.........950.........960.........970.........980
Sequence TLVKVSAISNLIRKHVSEARLVEDIGHELTYVLPYEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFL
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Known secondary structure (DSSP)


TT
TT


TTTTTSS




 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence KVAWKLTQQQFVALLWKRLLIARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLELQPWMYNEQY
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Known secondary structure (DSSP)

T
SSSS
TTS

S





GGGSS

 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence TFVSNDAPEDTGTLELLNALTKDPGFGTRCMEGNPIPDTPCQAGEEEWTTAPVPQTIMDLFQNGNWTMQN
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Known secondary structure (DSSP)
S
SSSSSTSTT
SSSSSSSS

STT













TTT



SSS
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence PSPACQCSSDKIKKMLPVCPPGAGGLPPPQRKQNTADILQDLTGRNISDYLVKTYVQIIAKSLKNKIWVN
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Known secondary structure (DSSP)
S






TT


SS



S
SSSS


SSS

TTS
TTTS


 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence EFRYGGFSLGVSSQEVNDAIKQMKKHLKLAKDSSADRFLNSLGRFMTGLDTKNNVKVWFNNKGWHAISSF
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Known secondary structure (DSSP)





SSS



TTTTTS

S
TTSTTS
 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence LNVINNAILRANLQKGENPSHYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVF
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Known secondary structure (DSSP)

S
S
STT






TTT
 .........1340.........1350.........1360.........1370.........1380.........1390.........1400
Sequence LIQERVSKAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVIIIFICFQQKSYVSSTNLPVLALLLLLY
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Known secondary structure (DSSP) TTTTTSSS

S

STTT
 .........1410.........1420.........1430.........1440.........1450.........1460.........1470
Sequence GWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVINDILKSVFLIFPHFCLGRGLIDMVKNQ
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Known secondary structure (DSSP) TSGGGTS


SS
TT


GGGS
 .........1480.........1490.........1500.........1510.........1520.........1530.........1540
Sequence AMADALERFGENRFVSPLSWDLVGRNLFAMAVEGVVFFLITVLIQYRFVDRICVGIPPGECFGLLGVNGA
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Known secondary structure (DSSP) T





TT
TTTSST


S





TT




TTS
 .........1550.........1560.........1570.........1580.........1590.........1600.........1610
Sequence GKSSTFKMLTEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRKLGLVKYGEKYA
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Known secondary structure (DSSP)


TTTT

SS



SSSBT

SSTS


TTSSSBG
 .........1620.........1630.........1640.........1650.........1660.........1670.........1680
Sequence GNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVVKEGRSVVLTSHSMEECEALCT
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Known secondary structure (DSSP) GGS
TTSS

S
S
S
SS

TTTTT




S

S
 .........1690.........1700.........1710.........1720.........1730.........1740.........1750
Sequence RMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIPDLKPVQDFFGLAFPGSVLKEKHRNMLQYQLPSSLSS
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Known secondary structure (DSSP) SSSSS
SS






TT

SS
TT
STT
 .........1760.........1770.........1780........
Sequence LARIFSILSQSKKRLHIEDYSVSQTTLDQVFVNFAKDQ
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Known secondary structure (DSSP) TT
S





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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