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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7tbwA_

Fold library idPDB HeaderMoleculeTitle
c7tbwA_3.10PDB header: transport proteinChain: A: PDB Molecule: atp-binding cassette, sub-family a (abc1), member 1;


Added to library: Sat Jan 29 13:40:07 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence CWPQLRLLLWKNLTFRRRQTCQLLLEVAWPLFIFLILISVRLSYPPYEQHECHFPNKAMPSAGTLPWVQG
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Known secondary structure (DSSP)

TS









GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence IICNANNPCFRYPTPGEAPGVVGNFNKSIVARLFSDARRLLLYSQKDTSMKDMRKVLRTLQQIKKSSSKS
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Known secondary structure (DSSP) TSS



SS

GGGSSS




SSST

T




 .........150.........160.........170.........180.........190.........200.........210
Sequence EEMIQLGDQEVSELCGLPREKLAAAERVLRSNMDILKPILRTLNSTSPFPSKELAEATKTLLHSLGTLAQ
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Known secondary structure (DSSP) T
SSSSS
TTTTTTTTTSTTTT
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence ELFSMRSWSDMRQEVMFLTSSTQIYQAVSRIVCGHTPYCNDLMKNLESSPLSRIIWKALKPLLVGKILYT
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Known secondary structure (DSSP)

S


TS


T
SS
T


B
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence PDTPATRQVMAEVNKTFQELAVFHDLEGMWEELSPKIWTFMENSQEMDLVRMLLDSRDNDHFWEQQLDGL
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Known secondary structure (DSSP) S

TTGGGTTTTTTS
SSSSTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence DWTAQDIVAFLAKHPVYTWREAFNETNQAIRTISRFMECVNLNKLEPIATEVWLINKSMELLDERKFWAG
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Known secondary structure (DSSP) SS







TSS





B

SSTT



 .........430.........440.........450.........460.........470.........480.........490
Sequence IVFTGITPGSIELPHHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFAYLQDVVEQAII
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Known secondary structure (DSSP)


SSSSS



S

TTTS

SS
SS
SS

S




TTTT
SS
 .........500.........510.........520.........530.........540.........550.........560
Sequence RVLTGTEKKTGVYMQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIVYEKEARLKETMRIMG
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Known secondary structure (DSSP) T

S






S

TTTTT
 .........570.........580.........590.........600.........610.........620.........630
Sequence LDNSILWFSWFISSLIPLLVSAGLLVVILKLGNLLPYSDPSVVFVFLSVFAVVTILQCFLISTLFSRANL
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Known secondary structure (DSSP)

TTSSSSS
TT
S
 .........640.........650.........660.........670.........680.........690.........700
Sequence AAACGGIIYFTLYLPYVLCVAWRDYVGFTLKIFASLLSPVAFGFGCEYFALFEEQGIGVQWDNLFESPVE
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Known secondary structure (DSSP) TT
SS

TTSSSTT


SSSSTT


SS
 .........710.........720.........730.........740.........750.........760.........770
Sequence EDGFNLTTSVSMMLFDTFLYGVMTWYIEAVFPGQYGIPRPWYFPCEPTHLKLGVSIQNLVKVYRDGMKVA
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Known secondary structure (DSSP)
SS




SS




TT




SSS


B

TTT



 .........780.........790.........800.........810.........820.........830.........840
Sequence VDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYILGKDIRSEMSTIRQNLGVCPQHNVLF
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Known secondary structure (DSSP) B





TT


TTSSSTTSS

STTTTT
TT
SS



 .........850.........860.........870.........880.........890.........900.........910
Sequence DMLTVEEHIWFYARLKGLSEKHVKAEMEQMALDVGLPSSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVI
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Known secondary structure (DSSP) SSSBTTT

T

SSSTTSBGGGS
TTSS

S
 .........920.........930.........940.........950.........960.........970.........980
Sequence LDQPTAGVDPYSRRGIWELLLKYRQGRTIILSTHHMDEADVLGDRIAIISHGKLCCVGSSLFLKNQLGTG
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Known secondary structure (DSSP) SS
SS

T
SSS

S
T
SSTT
S


 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence YYLTLVKSAISNLIRKHVSEARLVEDIGHELTYVLPAFVELFHEIDDRISSYGISETTLEEIFLKVAEES
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Known secondary structure (DSSP)



SS


SSS











T
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence GKGSYQVKGWKLTQQQFVALLWKRLLIARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLELQPW
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Known secondary structure (DSSP)


S



TS
TTT




S





ST
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence MYNEQYTFVSNDAPEDTGTLELLNALTKDPGFGTRCMEGNPIPDTPCQAGEEEWTTAPVPQTIMDLFQNG
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Known secondary structure (DSSP) TSSS

S

SSSSSSTT
SSSSSSSS

STT













S
STT
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence NWTMQNPSPACQCSKMLPVCPPGAGGLPPPQRKQNTADILQDLTGRNISDYLVKTYVQIIAKSLKNKIWV
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Known secondary structure (DSSP)


SSS
S







S



S
SS
S


SSS

TT

TT


 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence NEFRYGGFSLGVSNPSQEVNDAIKQMKKHLKLAKDSSADRFLNSLGRFMTGLDTKNNVKVWFNNKGWHAI
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Known secondary structure (DSSP)







TTT



TTTTT

S
TTSTT
 .........1340.........1350.........1360.........1370.........1380.........1390.........1400
Sequence SSFLNVINNAILRANLQKGENPSHYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASF
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Known secondary structure (DSSP)

S
S
SSS




SS
S
STGGG
 .........1410.........1420.........1430.........1440.........1450.........1460.........1470
Sequence VVFLIQERVSKAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVIIIFICFQQKSYVSSTNLPVLALLL
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Known secondary structure (DSSP) SSSTT

TT
TTTSSTTT
 .........1480.........1490.........1500.........1510.........1520.........1530.........1540
Sequence LLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTDNKLNNINDILKSVFLIFPH
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Known secondary structure (DSSP) STTTTT
S
SS

STTTS
 .........1550.........1560.........1570.........1580.........1590.........1600.........1610
Sequence FCLGRGLIDMVKNQAMADALERVSPLSWDLVGRNLFAMAVEGVVFFLITVLIQYRFFIDEDEDVRRERQR
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Known secondary structure (DSSP)


TTSTTTTTTT



 .........1620.........1630.........1640.........1650.........1660.........1670.........1680
Sequence ILDGGGQNDILEIKELTKIYRRKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTRGDAF
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Known secondary structure (DSSP) S

SS
SB

TTT
S
SB




TTS
TTSSTSS


 .........1690.........1700.........1710.........1720.........1730.........1740.........1750
Sequence LNKNSILSNIHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRKLGLVKYGEKY
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Known secondary structure (DSSP) SS

TTT
TT

SS



TTSBT

GGGTT

SSSTTSB
 .........1760.........1770.........1780.........1790.........1800.........1810.........1820
Sequence AGNYSGGNKRKLSTAMALIGGPPVVFLDQPTTGMDPKARRFLWNCALSVVKEGRSVVLTSHSMEECEALC
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Known secondary structure (DSSP) GGG

TSS

SS

SS

TT

S
T
 .........1830.........1840.........1850.........1860.........1870.........1880.........1890
Sequence TRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIDLKPVQDFFGLAFPGSVLKEKHRNMLQYQLPSSLSS
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Known secondary structure (DSSP) STTS

S

S




S


S

SS
TTS
S
 .........1900.........1910.........1920........
Sequence LARIFSILSQSKKRLHIEDYSVSQTTLDQVFVNFAKDQ
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Known secondary structure (DSSP) TTTTS


SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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