Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7t6dA_

Fold library idPDB HeaderMoleculeTitle
c7t6dA_3.90PDB header: membrane proteinChain: A: PDB Molecule: lipopolysaccharide assembly protein b;


Added to library: Sat Aug 20 10:01:02 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MLELLFLLLPVAAAYGWYMGRRSAQQNKQDEANRLSRDYVAGVNFLLSNQQDKAVDLFLDMLKEDTGTVE
Predicted secondary structure










SS confidence





































































Known secondary structure (DSSP)

TT

S

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence AHLTLGNLFRSRGEVDRAIRIHQTLMESASLTYEQRLLAIQQLGRDYMAAGLYDRAEDMFNQLTDETDFR
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP) T
T
TT

T
GGGTT
GGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence IGALQQLLQIYQATSEWQKAIDVAERLVKLGKDKQRVEIAHFYCELALQHMASDDLDRAMTLLKKGAAAD
Predicted secondary structure











SS confidence





































































Known secondary structure (DSSP) T

T

TTTTSTT

 .........220.........230.........240.........250.........260.........270.........280
Sequence KNSARVSIMMGRVFMAKGEYAKAVESLQRVISQDRELVSETLEMLQTCYQQLGKTAEWAEFLQRAVEENT
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP) SS
TT


SGGGGGGT
TTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence GADAELMLADIIEARDGSEAAQVYITRQLQRHPTMRVFHKLMDYHLNEAEEGRAKESLMVLRDMVGEKVR
Predicted secondary structure









SS confidence





































































Known secondary structure (DSSP)

S



SS
 .........360.........370.........380.........
Sequence SKPRYRCQKCGFTAYTLYWHCPSCRAWSTIKPIRGLDGL
Predicted secondary structure
































SS confidence






































Known secondary structure (DSSP) S
SSSS

SS

SB
TTT

BS


STT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D