PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c7sqkB_

Fold library id	PDB Header	Molecule	Title
c7sqkB_	8.00	PDB header: cell cycle	Chain: B: PDB Molecule: haus augmin-like complex subunit 2;

Links to external resources
Added to library: Sat Sep 24 13:58:33 2022

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M A A A N P W D P A S A P N G A G L V L G H F I A S G M V N Q E M L N M S K K T V S C F V N F T R L Q Q I T N I Q A E I Y Q K N L E I E L L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
S
T T S S S
S T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence K L E K D T A D V V H P F F L A Q K C H T L Q S M N N H L E A V L K E K R S L R Q R L L K P M C Q E N L P I E A V Y H R Y M V H L L E L A V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T T S T T T
S S S
S T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence T F I E R L E T H L E T I R N I P H L A A N L K K M N Q A L A K M D I L V T E T E E L A E N I L K W R K Q Q N E V S S C I P K I L A E E S Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
T T T

. . . . .

Sequence L Y K H D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	A	A	A	N	P	W	D	P	A	S	A	P	N	G	A	G	L	V	L	G	H	F	I	A	S	G	M	V	N	Q	E	M	L	N	M	S	K	K	T	V	S	C	F	V	N	F	T	R	L	Q	Q	I	T	N	I	Q	A	E	I	Y	Q	K	N	L	E	I	E	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S	S		S															T	T	S	S	S		S					T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	L	E	K	D	T	A	D	V	V	H	P	F	F	L	A	Q	K	C	H	T	L	Q	S	M	N	N	H	L	E	A	V	L	K	E	K	R	S	L	R	Q	R	L	L	K	P	M	C	Q	E	N	L	P	I	E	A	V	Y	H	R	Y	M	V	H	L	L	E	L	A	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T	T	T	S																							T	T									T					S	S	S					S	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	F	I	E	R	L	E	T	H	L	E	T	I	R	N	I	P	H	L	A	A	N	L	K	K	M	N	Q	A	L	A	K	M	D	I	L	V	T	E	T	E	E	L	A	E	N	I	L	K	W	R	K	Q	Q	N	E	V	S	S	C	I	P	K	I	L	A	E	E	S	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T											S		T	T	T
	.	.	.	.	.
Sequence	L	Y	K	H	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S