Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7sn8I_

Fold library idPDB HeaderMoleculeTitle
c7sn8I_2.74PDB header: nucleaseChain: I: PDB Molecule: integrator complex subunit 9;


Added to library: Sat Oct 15 12:12:20 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MRLYCLSGDLAKPCYIITFKGLRIMLDCGLTEQTVLNFLPLPFVQSLKWSNLPNFVPSRDHDPQMDGELK
Predicted secondary structure





















































SS confidence





































































Known secondary structure (DSSP)





SSS

SSS




BGGGGGGB

B
SS

TTSSS

B


SS


TTTBTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence DCCGRVFVDSTPEFNLPMDKMLDFSEVDVILISNYLNMLALPYITENTGFKGKVYATEPTLQIGRFFLEE
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP)
SS

S


BB


SSSS
SSS




SGGGTTSSSS

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence LVDYIEVSPKACTARLWKEKLHLLPSPLSEAFRAKKWRTIFSLKDVQGSLSKVTIMGYDEKLDILGAFIA
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP) S






TTTT

SSS
TTTTT
SS
SS
B



TT
TT

TTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence TPVSSGYCLGSSNWVLSTAHEKICYVSGSSTLTTHPRPINQSALKHADVLIMTGLTQAPTVNPDTKLGEL
Predicted secondary structure








































SS confidence





































































Known secondary structure (DSSP)


TTSTT



SS

S


S

SB




GGGTT
S



SSTT

 .........290.........300.........310.........320.........330.........340.........350
Sequence CMNVALTIRNNGSALIPCYPSGVVYDLFECLTQNLENAGLNNVPMFFISPVADSSLAYSNILAEWLSSAK
Predicted secondary structure













SS confidence





































































Known secondary structure (DSSP) TT




TTSSTT

S


TTTT
GGGB
 .........360.........370.........380.........390.........400.........410.........420
Sequence QNKVYLPDDPFPHAFYLRNNKLKHYNHVFSEGFSKDFRQPCVVFCGHPSLRFGDAVHFIEMWGNNPNNSI
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP) GGGTTT

SSTTTSS
TTSTT

SS

S
TTSSBSSTT
TT
 .........430.........440.........450.........460.........470.........480.........490
Sequence IFTEPDFPYLQVLAPFQPLAMKAFYCPIDTSLNYQQANKLIKELKPNVLVIPEAYTKPPNLFIEQPDKKI
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP)



TTS
TGGG
S

S








S



STTTS




S


TTS
 .........500.........510.........520.........530.........540.........550.........560
Sequence ITFKCGEIIRLPLKRKLDRIYITSELAQKISPKEVAAGVTFSTLTGVLQVKDKVHCIQPCKEDVLKNVKY
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP)
TT
B












B
T



SSS







TTT






SSGGG


 .........570.........580.........590.........600.........610.........620.........630
Sequence EYGSIDVDAVMKKLAQDGFSNIKLDRTGGALTLNLVNEDTVIKFEDNETHIICGGKPTTRLKLRDTIMKC
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP) S


TTTTTTT



TTTTTT
SS




ST
 ....
Sequence LQSF
Predicted secondary structure

SS confidence



Known secondary structure (DSSP) S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D