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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7smoD_

Fold library idPDB HeaderMoleculeTitle
c7smoD_4.12PDB header: transcriptionChain: D: PDB Molecule: dead/deah box rna helicase;


Added to library: Wed Jun 22 02:40:55 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KIKVDELPVPEKFKEVLKSEGVRELLPVQSLAVKNGLLDGENLLVVSATASGKTLIGELAGVPKAMQGKK
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Known secondary structure (DSSP)

BSTTS
S
TS


B

TTGGGT


SSS
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence LLFLVPLVALANQKYEDFKRRYSKLGLRVAIRVGMSRIKTKDELVVVDTGIDADIIVGTYEGIDYLLRAG
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Known secondary structure (DSSP) SSSGGGT


S





TTS






TTSSSTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence RKIGNVGTIVIDEIHTLDDEERGPRLDGLIARLRKLYPKAQFIGLSATVGNPDELAKELGLKLVLYDERP
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Known secondary structure (DSSP)



SSSGGGGSSTTT
SSS


S
TTT



S
 .........220.........230.........240.........250.........260.........270.........280
Sequence VDLERHIIIVRNESEKWRHIANLCRAEAMRKSKQGYKGQSIVFTFSRKRTHELAAYLTSKGLKAKPYHSG
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Known secondary structure (DSSP) S


SSS


SSS




SSTT



TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence LPYKQRKLTEMEFLAQRLDVVVTTAALGAGVDFPASQVIFESLAMGNKWLSVREFHQMLGRAGRPLYHEK
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Known secondary structure (DSSP) S
TT



TT

TT




SS
STT

TTSS
SS

S
 .........360.........370.........380.........390.........400.........410.........420
Sequence GKVYLLVEPGRKYSAQMEGTEDEVAFKLLTAPIEPVQVEWSDELEQDNVLAHSCVFNRLDVIEEVQSMCL
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Known secondary structure (DSSP)

TT

SSSS
SS













BT
S
 .........430.........440.........450.........460.........470.........480.........490
Sequence GANQSAEKVLEKLEEFDFVKMKRPIVEVTPYGRAVSMSFLLPKEATFIRGNLGKREARWIAVKLLPFENI
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Known secondary structure (DSSP) S

S
TSTT
TT

TBTTB
S



 .........500.........510.........520.........530.........540.........550.........560
Sequence YLSGTLQRELEGAVRGRLSANVFSPSFASILEELDKVIPELSPNAAERLFTIYQEFFMCPEEDCTEYAME
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Known secondary structure (DSSP)
SSS


SBSSSTTSTTS


SSS

 .........570.........580.........590.........600.........610.........620.........630
Sequence RVSNLIIELRRSGKHPTQIAEHFRKVYGLIVYPGDVFTWLDGIVRKLEAIERIARVFRVRKTEEGAKILK
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Known secondary structure (DSSP) T



T
 ........
Sequence REIEEGRM
Predicted secondary structure


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Known secondary structure (DSSP) TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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