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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7smoB_

Fold library idPDB HeaderMoleculeTitle
c7smoB_4.12PDB header: transcriptionChain: B: PDB Molecule: dead/deah box rna helicase;


Added to library: Wed Jun 22 01:51:57 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VDELPVPEKFKEVLKSEGVRELLPVQSLAVKNGLLDGENLLVVSATASGKTLIGELAGVPKAMQGKKLLF
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Known secondary structure (DSSP)
TTS
S
TS


S

TTTTTT


SSS

TTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence LVPLVALANQKYEDFKRRYSKLGLRVAIRVGMSRIKTKDELVVVDTGIDADIIVGTYEGIDYLLRAGRKI
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Known secondary structure (DSSP) SSSTTTT

SS





TTS






TTSSSTTT


 .........150.........160.........170.........180.........190.........200.........210
Sequence GNVGTIVIDEIHTLDDEERGPRLDGLIARLRKLYPKAQFIGLSATVGNPDELAKELGLKLVLYDERPVDL
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Known secondary structure (DSSP)
SSSGGGGSSTT
SSS


S
TTT

S
SS

 .........220.........230.........240.........250.........260.........270.........280
Sequence ERHIIIVRNESEKWRHIANLCRAEAMRKSKQGYKGQSIVFTFSRKRTHELAAYLTSKGLKAKPYHSGLPY
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Known secondary structure (DSSP)
SST


SSS





SSTT


TTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence KQRKLTEMEFLAQRLDVVVTTAALGAGVDFPASQVIFESLAMGNKWLSVREFHQMLGRAGRPLYHEKGKV
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Known secondary structure (DSSP) TT



TT

TT




SS
SBSSSSB

TTSS

TT



 .........360.........370.........380.........390.........400.........410.........420
Sequence YLLVEPGRKYSAQMEGTEDEVAFKLLTAPIEPVQVEWSDELEQDNVLAHSCVFNRLDVIEEVQSMCLGAN
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Known secondary structure (DSSP)
TT

SSSS
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BT
SS

 .........430.........440.........450.........460.........470.........480.........490
Sequence QSAEKVLEKLEEFDFVKMKRPIVEVTPYGRAVSMSFLLPKEATFIRGNLGKREARWIAVKLLPFENIYLS
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Known secondary structure (DSSP) S
TSTT
TT

TTTTS
S




 .........500.........510.........520.........530.........540.........550.........560
Sequence GTLQRELEGAVRGRLSANVFSPSFASILEELDKVIPELSPNAAERLFTIYQEFFMCPEEDCTEYAMERVS
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Known secondary structure (DSSP) SSS


SBSSSTTSTTS


SSS

 .........570.........580.........590.........600.........610.........620.........630
Sequence NLIIELRRSGKHPTQIAEHFRKVYGLIVYPGDVFTWLDGIVRKLEAIERIARVFRVRKTEEGAKILKREI
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Known secondary structure (DSSP) T



TT
 ...
Sequence EEG
Predicted secondary structure

SS confidence


Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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