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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7sgrF_

Fold library idPDB HeaderMoleculeTitle
c7sgrF_2.90PDB header: membrane proteinChain: F: PDB Molecule: alpha-hemolysin translocation atp-binding protein hlyb;


Added to library: Sat Sep 17 10:35:58 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KFDFTWFIPAIIKYRKIFIETLVVSVFLQLFALITPLFFQVVMDKVLVHRGFSTLNVITVALSVVVVFEI
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Known secondary structure (DSSP)

STTTTTTTT

SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence ILSGLRTYIFAHSTSRIDVELGAKLFRHLLALPISYFESRRVGDTVARVRELDQIRNFLTGQALTSVLDL
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Known secondary structure (DSSP) TTS
TS
TSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence LFSFIFFAVMWYYSPKLTLVILFSLPCYAAWSVFISPILRRRLDDKFSRNADNQSFLVESVTAINTIKAM
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Known secondary structure (DSSP) T

TTTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence AVSPQMTNIWDKQLAGYVAAGFKVTVLATIGQQGIQLIQKTVMIINLWLGAHLVISGDLSIGQLIAFNML
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Known secondary structure (DSSP) S
STTSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence AGQIVAPVIRLAQIWQDFQQVGISVTRLGDVLNSPTESYHGKLALPEINGNITFRNIRFRYKPDSPVILD
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Known secondary structure (DSSP) TSTS






SS





S

SSTTS

S
 .........360.........370.........380.........390.........400.........410.........420
Sequence NINLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLIDGHDLALADPNWLRRQVGVVLQDNVLLN
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Known secondary structure (DSSP)
TT


TTSGGGSSTTTS

STTGGGS
TT
SS



S
 .........430.........440.........450.........460.........470.........480.........490
Sequence RSIIDNISLANPGMSVEKVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKI
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Known secondary structure (DSSP) SBTTTSSS

T
SSSGGG
B

GGGTTS
S

S
 .........500.........510.........520.........530.........540.........550.........560
Sequence LIFDEATSALDYESEHIIMRNMHKICKGRTVIIIAHRLSTVKNADRIIVMEKGKIVEQGKHKELLSEPES
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Known secondary structure (DSSP) S
STTS
TTT

SSSSTTTTSSSSS

T
TTS
 .........570
Sequence LYSYLYQLQS
Predicted secondary structure

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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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