Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7sd1A_

Fold library idPDB HeaderMoleculeTitle
c7sd1A_3.19PDB header: signaling proteinChain: A: PDB Molecule: leucine-rich repeat protein shoc-2;


Added to library: Wed Jun 22 16:14:20 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SSNAEVIKELNKCREENSMRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALS
Predicted secondary structure










































SS confidence





































































Known secondary structure (DSSP)

T
S
TTS

SS

GGGGG
TT
S

SS

S


GGGGG
TT



 .........80.........90.........100.........110.........120.........130.........140
Sequence ENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRE
Predicted secondary structure






























































SS confidence





































































Known secondary structure (DSSP) SS





GGGGG
TT


TTS

SS

GGGGG
TT
S
TTS





GGGGG
TT



S
 .........150.........160.........170.........180.........190.........200.........210
Sequence NKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYN
Predicted secondary structure





































































SS confidence





































































Known secondary structure (DSSP) S





GGGGG
TT



SS

SB

GGGGG
TT



SS


B

GGGGG
TT



SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence RLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEH
Predicted secondary structure





































































SS confidence





































































Known secondary structure (DSSP)

S


GGGGG
TT



SS





TTSGGG
TT


TTS

SS

SS
GGGGTT
S

S
 .........290.........300.........310.........320.........330.........340.........350
Sequence NRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSN
Predicted secondary structure





































































SS confidence





































































Known secondary structure (DSSP) S





TTTTTT
TT



SS


S

TTGGG
TT



SS





GGGGG
TT



S
 .........360.........370.........380.........390.........400.........410.........420
Sequence NLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGEN
Predicted secondary structure






























































SS confidence





































































Known secondary structure (DSSP) S





GGGGG
TT



SS





GGGGG
TT



SS





GGGGG
TT



SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence LLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKM
Predicted secondary structure












































SS confidence





































































Known secondary structure (DSSP)





GGGGG
TT


TT
TT




GGGGG
TT


TT


TTS
T
 .......
Sequence QGPYRAM
Predicted secondary structure






SS confidence






Known secondary structure (DSSP) STTS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D