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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7sbbI_

Fold library idPDB HeaderMoleculeTitle
c7sbbI_3.10PDB header: rna binding protein/rnaChain: I: PDB Molecule: cas10d;


Added to library: Wed Jun 22 06:04:17 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TTLLQTLLIRTLSEQKDYILLEYFQTILPALEEHFGNDQTLAAHILNALLTTWNVMQELEFPLNDIERRL
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Known secondary structure (DSSP)

S
SSS
T




SSS


 .........80.........90.........100.........110.........120.........130.........140
Sequence LCLGITLHDYIQEIINICLELGKRLNFDEFWADWRDYIAEISYLAQWSNAGYPFTIKERKLDHPLRHLLT
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Known secondary structure (DSSP) TT

TT
GGGGTT



TT



SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence FGDVAVHLSSPHDLVSSTMGDRLRDLLNRLGIEKRFVYHHLRDTTGILSNAIHNVILRTVQKLDWKPLLF
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Known secondary structure (DSSP) TT

SGGGGTST


S


TTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence FAQGVIYFAPQDTEIPERNEIKQIVWQGISQELGKKMSAPTRQIFEDYLDRYLEIQGWESDHQAFIQELE
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Known secondary structure (DSSP) TT
TT






TT



T
 .........290.........300.........310.........320.........330.........340.........350
Sequence NYVSKIWSLEMLLRQAFWSVPSGKFEDQQPIFIYLYPAYVYAPQVVEAIRELVYGIASVNLWDVRKHWVN
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Known secondary structure (DSSP)

T


SS
GGGG


SS
B
TTB



T
 .........360.........370.........380.........390.........400.........410.........420
Sequence NKMDLTSLKSLPWLNQLKYTKEDLPFLATVYTTTREKTDTDAWVKPAFLALLLPYLLGVKAIATRSMVPL
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Known secondary structure (DSSP) TTT
GGGGGGS

B


S
TTS


SS

SS



S
SS

 .........430.........440.........450.........460.........470.........480.........490
Sequence YRSDQDFRESIHLDGVAGFWSLLGIPTDLRVEDITPALNKLLAIYTLHLAARSSPPKARWQDLPKTVQEV
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Known secondary structure (DSSP)


TTGGGSSTT

T

S
GGGTTSS
BTTB

GGG
 .........500.........510.........520.........530.........540.........550.........560
Sequence MTDVLNVFALAEQGLRREKRDRPYESEVTEYWQFAELFSQGNIVMTEKLKLTKRLVEEYRRFYQVELSKK
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Known secondary structure (DSSP)
TTTT
SS

TTT
TTT



GGG
 .........570.........580.........590.........600.........610.........620.........630
Sequence PSTHAILLPLSKALEQILSVPDDWDEEELILQGSGQLQAALDRQEVYTRPIIKDKSVAYETRQLQELEAI
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Known secondary structure (DSSP)

TS
TTS
TTS
GGG

TTS
 .........640.........650.........660.........670.........680
Sequence QIFMTTCVRDLFGEMCKGDRAILQEQRNRIKSGAEFAYRLLALEAQQNQN
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Known secondary structure (DSSP)





TTT
T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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