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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7sbaI_

Fold library idPDB HeaderMoleculeTitle
c7sbaI_2.90PDB header: dna binding protein/dna/rnaChain: I: PDB Molecule: cas10d;


Added to library: Wed Jun 22 01:50:09 2022
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence TTLLQTLLIRTLSEQKDYILLEYFQTILPALEEHFGNDQTLAAHILNALLTTWNVMQELEFPLNDIERRL
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Known secondary structure (DSSP)

TTT

GGGTS




TT
SS


 .........80.........90.........100.........110.........120.........130.........140
Sequence LCLGITLHDYIQEIINICLELGKRLNFDEFWADWRDYIAEISYLAQWSNAGYPFTIKERKLDHPLRHLLT
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Known secondary structure (DSSP) TT

TT
GGGGTTTT



TT



SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence FGDVAVHLSSPHDLVSSTMGDRLRDLLNRLGIEKRFVYHHLRDTTGILSNAIHNVILRTVQKLDWKPLLF
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Known secondary structure (DSSP) TT

SGGGGTSTT

TT

GGGT
 .........220.........230.........240.........250.........260.........270.........280
Sequence FAQGVIYFAPQDTEIPERNEIKQIVWQGISQELGKKMSAGDVGFKRDGKGLKVSPQTSELLAAADIVRIL
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Known secondary structure (DSSP) TTTT




TSSS

TTS

TTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence PQVISVKVNNAKSPATPKRLEKLELGDAEREKLYEVADLRCDRLAELLGLVQKEIFLLPEPFIEWVLKDL
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Known secondary structure (DSSP)



SS
T

TTTTT
ST
SSST
 .........360.........370.........380.........390.........400.........410.........420
Sequence ELTSVIMPEETQVQSGGVNYGWYRVAAHYVANHATWDLEEFQEFLQGFGDRLATWAEEEGYFAEHQSPTR
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Known secondary structure (DSSP) T
TTTS
SGGG


STT

TTT

T
S




 .........430.........440.........450.........460.........470.........480.........490
Sequence QIFEDYLDRYLEIQGWESDHQAFIQELENYVNAKTKKSKQPICSLSSGEFPSEDQMDSVVLFKPQQYSNK
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Known secondary structure (DSSP) TT






TTTTSTT

S

BSSS


S


TTTSSS
SSS

SS
 .........500.........510.........520.........530.........540.........550.........560
Sequence NPLGGGQIKRGISKIWSLEMLLRQAFWSVPSGKFEDQQPIFIYLYPAYVYAPQVVEAIRELVYGIASVNL
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Known secondary structure (DSSP) S
TT
S

S



SS
SGGG


SS
B
TTB



 .........570.........580.........590.........600.........610.........620.........630
Sequence WDVRKHWVNNKMDLTSLKSLPWLNQLKYTKEDLPFLATVYTTTREKTDTDAWVKPAFLALLLPYLLGVKA
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Known secondary structure (DSSP) TTTT
GGGGGGS

B


S
TTS


SS



S
S

 .........640.........650.........660.........670.........680.........690.........700
Sequence IATRSMVPLYRSDQDFRESIHLDGVAGFWSLLGIPTDLRVEDITPALNKLLAIYTLHLAARSSPPKARWQ
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Known secondary structure (DSSP) S
SS




TTGGGSSTT

TTT

S
GGGTTSS
BTTB

GG
 .........710.........720.........730.........740.........750.........760.........770
Sequence DLPKTVQEVMTDVLNVFALAEQGLRREKRDRPYESEVTEYWQFAELFSQGNIVMTEKLKLTKRLVEEYRR
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Known secondary structure (DSSP) G
TTTT
SS

TTT
TT
 .........780.........790.........800.........810.........820.........830.........840
Sequence FYQVELSKKPSTHAILLPLSKALEQILSVPDDWDEEELILQGSGQLQAALDRQEVYTRPIIKDKSVAYET
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Known secondary structure (DSSP) T



GGG


TS
TTS
TTS
GGG
TTTS
TTS
 .........850.........860.........870.........880.........890.........
Sequence RQLQELEAIQIFMTTCVRDLFGEMCKGDRAILQEQRNRIKSGAEFAYRLLALEAQQNQN
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Known secondary structure (DSSP)





TTT
T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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