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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7s7bF_

Fold library idPDB HeaderMoleculeTitle
c7s7bF_4.06PDB header: rna binding protein/rnaChain: F: PDB Molecule: zinc finger cchc domain-containing protein 8,zinc finger


Added to library: Wed Jun 22 00:15:16 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DAELRERLRQCEETIEQLRAENQELKRKLNILTRPSGILVNDTKLDGPILQILFMNNAISKQYHQEIEEF
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Known secondary structure (DSSP)
GGG

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STTTSS







SST
 .........80.........90.........100.........110.........120.........130.........140
Sequence VSNLVKRFEEQQKNDVEKTSFNLLPQPSSIVLEEDHKVEESCAIKNNKEAFSVVGSVLYFTNFCLDKLGQ
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Known secondary structure (DSSP) T
S








TT

B


B

S

SS
TB



SS
S

 .........150.........160.........170.........180.........190.........200.........210
Sequence PLLNENPQLSEGWEIPKYHQVFSHIVSLEGQEHCFNCGSEEHQMKDCPMPNFQQRYHAEEVEERFGRFKP
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Known secondary structure (DSSP)

SSS
TTTSSS










S
SS
SS



TTT

TTS
STT
S






TT


GGGSS



S
 .........220.........230.........240.........250.........260.........270.........280
Sequence GVISEELQDALGVTDKSLPPFIYRMRQLGYPPGWLKEAELENSGLALYDGKSVTYDLSKLVNYPGFNIST
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Known secondary structure (DSSP) S


T

SSS


S
ST













GGG



BTTTB

 .........290.........300.........310.........320.........330.........340.........350
Sequence PRGIPDEWRIFGSIPMQACQQKDVFANYLPIPDMSKFATGITPFEFENMAESTGMYLRIRSLLKNSPRNQ
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Known secondary structure (DSSP)
TT



TTTTT




TTTS




TSSS





S




STSS
 ..
Sequence QK
Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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