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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7s5xE_

Fold library idPDB HeaderMoleculeTitle
c7s5xE_3.70PDB header: membrane proteinChain: E: PDB Molecule: atp-binding cassette sub-family c member 8;


Added to library: Sat Dec 4 16:34:29 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MGPLAFCGSENHSAAYRVDQGVLNNGCFVDALNVVPHVFLLFITFPILFIGWGSQSSKVHIHHSTWLHFP
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Known secondary structure (DSSP)
TT

SS


SS

SS


S
SSTTSSTTSS
SSS



S




S
 .........80.........90.........100.........110.........120.........130.........140
Sequence GHNLRWILTFMLLFVLVCEIAEGILSDGVTESHHLHLYMPAGMAFMAAVTSVVYYHNIETSNFPKLLIAL
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Known secondary structure (DSSP) STTSSS

GGGTS

TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence LVYWTLAFITKTIKFVKFLDHAIGFSQLRFCLTGLLVILYGMLLLVEVNVIRVRRYIFFKTPREVKPPED
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Known secondary structure (DSSP) TT

TTBT

SSS


SSSSS






TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence LQDLGVRFLQPFVNLLSKGTYWWMNAFIKTAHKKPIDLRAIGKLPIAMRALTNYQRLCEAFDAQVGARAI
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Known secondary structure (DSSP) TTT
S




TTS
S
TTTTS


STTT



STT
BTTBTSS


 .........290.........300.........310.........320.........330.........340.........350
Sequence WQALSHAFGRRLVLSSTFRILADLLGFAGPLCIFGIVDHLGKLGVYFVSSQEFLANAYVLAVLLFLALLL
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Known secondary structure (DSSP) SSTTTSSTT

TTS

BTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence QRTFLQASYYVAIETGINLRGAIQTKIYNKIMHLSTSNLSMGEMTAGQICNLVAIDTNQLMWFFFLCPNL
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Known secondary structure (DSSP) TTB
TTSS

T
 .........430.........440.........450.........460.........470.........480.........490
Sequence WAMPVQIIVGVILLYYILGVSALIGAAVIILLAPVQYFVATKLSQAQRSTLEYSNERLKQTNEMLRGIKL
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Known secondary structure (DSSP) TGGGTTTT
 .........500.........510.........520.........530.........540.........550.........560
Sequence LKLYAWENIFRTRVETTRRKEMTSLRAFAIYTSISIFMNTAIPIAAVLITFVGHVSFFKEADFSPSVAFA
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Known secondary structure (DSSP) TT
SSS





 .........570.........580.........590.........600.........610.........620.........630
Sequence SLSLFHILVTPLFLLSSVVRSTVKALVSVQKLSEFLSSAEIRDNCCVQIMGGYFTWTPDGIPTLSNITIR
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Known secondary structure (DSSP) TTGGGTT

B





SSSSS

S

 .........640.........650.........660.........670.........680.........690.........700
Sequence IPRGQLTMIVGQVGCGKSSLLLAALGEMQKVSGAVFWSRGPVAYASQKPWLLNATVEENIIFESPFNKQR
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Known secondary structure (DSSP) TT



TTSST
S







SS



SSBSSS


 .........710.........720.........730.........740.........750.........760.........770
Sequence YKMVIEACSLQPDIDILPHGDQTQIGERGINLSGGQRQRISVARALYQHANVVFLDDPFSALDIHLSDHL
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Known secondary structure (DSSP) T
TSTTGGG
BBSSSSB


STTSS

S
TTSS

 .........780.........790.........800.........810.........820.........830.........840
Sequence MQAGILELLRDDKRTVVLVTHKLQYLPHADWIIAMKDGTIQREGTLKDFQRSECQLFEHWKTLMNRQDQE
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Known secondary structure (DSSP) TTTTTTT

S
TTSTTS
S
TT
T
T
TTS
 .........850.........860.........870.........880.........890.........900.........910
Sequence LEKEPWRACAKYLSSAGILLLSLLVFSQLLKHMVLVAIDYWLAKWTDSADQTVYAMVFTVLCSLGIVLCL
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Known secondary structure (DSSP)





TTS



TTT
 .........920.........930.........940.........950.........960.........970.........980
Sequence VTSVTVEWTGLKVAKRLHRSLLNRIILAPMRFFETTPLGSILNRFSSDCNTIDQHIPSTLECLSRSTLLC
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Known secondary structure (DSSP) TSSSSTT

S
T
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence VSALAVISYVTPVFLVALLPLAIVCYFIQKYFRVASRDLQQLDDTTQLPLLSHFAETVEGLTTIRAFRYE
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Known secondary structure (DSSP)
SGGGTTSSTTTTTTT
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence ARFQQKLLEYTDSNNIASLFLTAANRWLEVRMEYIGACVVLIAAVTSISNSLHRELSAGLVGLGLTYALM
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Known secondary structure (DSSP) TTSS


S
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence VSNYLNWMVRNLADMELQLGAVKRIHGLLKTEAESYEGLLAPSLIPKNWPDQGKIQIQNLSVRYDSSLKP
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Known secondary structure (DSSP) T





S
SS
TTTS
SS

SS

SSSSS
B
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence VLKHVNALIAPGQKIGICGRTGSGKSSFSLAFFRMVDTFEGHIIIDGIDIAKLPLHTLRSRLSIILQDPV
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Known secondary structure (DSSP) SS



TT



TTSSTTTSS


TTSSSS
S
B


SS

 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence LFSGTIRFNLDPERKCSDSTLWEALEIAQLKLVVKALPGGLDAIITEGGENFSQGQRQLFCLARAFVRKT
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Known secondary structure (DSSP)

S
SSS


TTT
STTSS


TTSTTS
TTS

 .........1340.........1350.........1360.........1370.........1380.........1390.........1400
Sequence SIFIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVHTILSADLVIVLKRGAILEFDKPEKLLSRK
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Known secondary structure (DSSP) S
S
STTS
SSSS
SSTTSSTTSS
TT
SSS
 .........1410..
Sequence DSVFASFVRADK
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Known secondary structure (DSSP) S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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