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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7s01C_

Fold library idPDB HeaderMoleculeTitle
c7s01C_3.40PDB header: transcription/dnaChain: C: PDB Molecule: dna-directed rna polymerase;


Added to library: Sat Jul 9 08:58:46 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MDDISVIKNEDYEGSHRFLAEELLMPNANKTDGNRSTMFCSHLAQAVTLQKAEPPLVYTNFENQVGKYST
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Known secondary structure (DSSP)
GGGGG

TTTTSS

SS
SGGGGSTTTTTS
B

BTT
B

S
S

T
 .........80.........90.........100.........110.........120.........130.........140
Sequence AGYRKANSNYKVIEKIYKNDYNYVLIVQDQETGEYTLFERAECEFLTEHYGFQWDNDKIDSLKKDDTIEK
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Known secondary structure (DSSP) TS

S
SSSS
TTT


STT


TT

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence DTVLYKNTCYDENMNFGYGVNLNAAYFSYKNETLEDAIVISESAAKKLGTFSVNKVKVSVNTNDILLNLY
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Known secondary structure (DSSP) S
TTB
TT

B
SB


TTTTTTTS

SS


 .........220.........230.........240.........250.........260.........270.........280
Sequence GDNENYKGFPDIGEHIKNQIIASRRRFDYNTALYELKNLNEMRDSDTPFFADGKIVDIEIFSNVPEEELK
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Known secondary structure (DSSP)
SS
SS

SS
B
STT

TTTSSSTTS

TT


S
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence VQKYNEQVLYYINKQKEFSNNVYQKLKKIVEGKDNNVSDKLLHFYNNCKMRIDENISYTYQNSKFSGFIM
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Known secondary structure (DSSP)
STTS
TT

B
STT


BSSSSB
SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence EFTILEEEPLNKGSKITGRYGNKGVISKILPDDQMPTVAEGRFKGLKADICLNPLGVFNRLNPSQLIEQE
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Known secondary structure (DSSP)


TT
B
SSS



TTSS
BB
SSTTTT
B
S

TTTTTTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence LNWIAKFIRKDMEEAGSNEEKVSILLDFLNRVNKEETELMEEFINSLNKTELEEFLNDIIENGIPICQKP
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Known secondary structure (DSSP)



S





S
 .........500.........510.........520.........530.........540.........550.........560
Sequence FFGNIGLDELWELYNHYDHIDYFKCEGISTPLIIGEIYMVRLKHEPHSKFSARSTSFMNLRGLPAKSKNF
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Known secondary structure (DSSP) SSS



TT


B
BTT
SS
B
BS

TTTS



SS

B
TTSSB


TTT
 .........570.........580.........590.........600.........610.........620.........630
Sequence KEHKDLYSKTPVRIGNMEISNLSLTNEMGSIMDMLNSYSNNETNRRELIMQLLTGNPFDTNIDLSDVESG
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Known secondary structure (DSSP) TTTS
SS







TTSS
TT
SS
SSS









 .........640.........
Sequence TSKILKSLFTCLGLSIDDV
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Known secondary structure (DSSP) T






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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