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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7s00e_

Fold library idPDB HeaderMoleculeTitle
c7s00e_3.30PDB header: transcriptionChain: E: PDB Molecule: dna-directed rna polymerase;


Added to library: Sat Jul 9 08:40:40 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MISNFRKFHGNKNQEKFNENLILNKENESILNYLDPICKTLEIIPEITYLGSSVEPINKVYKFNKEEKTS
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Known secondary structure (DSSP)
T





TTTTT

TSSS










SS



 .........80.........90.........100.........110.........120.........130.........140
Sequence DIERSELQLIKMSFLIEKDDKKEEINKFIYFPKLIDSQYFIINGNRYYPIYQLLDSGTYRTNKALTLKTL
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Known secondary structure (DSSP)
SS



SS


BTTTBTT


S
TT

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence LMPIVLREKKETFDDINGETHTMLNVDLDLFKSKVPFLIYFFSKFGFEGTLEYFGLQDLIHVLMKEDLDQ
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Known secondary structure (DSSP) SS

TTS
TTT
T
TTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence LDEDEINDNVIFMITKNISLVVDKNFFSNKNNQIIIATLLNCFNTRIKIDKIYEKDYWVKKLGGYFTTNN
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Known secondary structure (DSSP) S
S
TT

SS
SS

T



S
 .........290.........300.........310.........320.........330.........340.........350
Sequence SNKQEKGEGIILSFERILDEWTKKILRTEEKNKEDIYSVVRWMINNYLALVKQDNMNLANKRIRLYEYLL
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Known secondary structure (DSSP) SSS


S
GGGGSSTS

SS
GGGSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence HPLLIKFSKGTYRVLNNRNSNKFEKIKTIFSNIQEGFLVKKIINNELLRYDNSVNSISLFTLILRYTQSG
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Known secondary structure (DSSP) T

S
S
TTTT
S



SS






TS

 .........430.........440.........450.........460.........470.........480....
Sequence PQSPFSSNSTNNKLRGLHPSYLGRLGLTSTSAGDPGASGSLTPFLELPENSYMHFTEEPEINLN
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Known secondary structure (DSSP) SS
S

TTTT
S

GGGTTTB
SS


SSSTTTB
TT



TTSSSBSSSS
SS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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