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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7s00D_

Fold library idPDB HeaderMoleculeTitle
c7s00D_3.30PDB header: transcriptionChain: D: PDB Molecule: dna-directed rna polymerase;


Added to library: Sat Jul 9 08:51:32 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MEKTYNLNDILLSNEYEKIKEDIKEEIINDMASKKVKYSNTSEFAKNDFLKDEFIDLVVDGETYEITYGN
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Known secondary structure (DSSP)

STSTTS




SSSS





GGGSTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence LITLLIVARPFNHFKVPMTEDLLFDLSDLKEYQNYYTTLLEHFGYSNEIKSIIKDVISELAIFSGDINVT
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Known secondary structure (DSSP) TT



GGG


TT
TTTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence FGNTVSIKSLIDLGNKVKRFRELLHYRLPNDEALEFNDIEAIIKKNLDEIMKILSETDNMLRYYIDSGAG
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Known secondary structure (DSSP)





T





TT

SS

TTTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence INSKQFGQVLSLVGSKPDLFGKIIPYPINTSFLRGLDVRSFYINALGARKALITNYQQVRNSGYLTRKIS
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Known secondary structure (DSSP)

T

B

B
SSS
B
SS
B
S
TTT


TT



 .........290.........300.........310.........320.........330.........340.........350
Sequence MLLMDTKLIDLDDCGSHENNYLSINVENKDVLKRFSKRSYLNNNGELVEIDINDESLIGQVIKIPSPTTC
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Known secondary structure (DSSP) SS

B


S




TTTS

STTTS

SSSS


TT
GGGTT


TTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence ASNEGVCRKCYGKLFDINKDLNIGMIAVLLLTDPLTQRLLSAKHLELSKPLREIKDLIETNKYIKDHNVN
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Known secondary structure (DSSP)

SS
B

TTTTS



SSSTTTTTS
 .........430.........440.........450.........460.........470.........480.
Sequence EVVNYFIYLLNESGINIQSVHSELIIREMMKLDDSDRTQFKNDKMPDYEIFRITDANLKGD
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Known secondary structure (DSSP) T




SS

SGGGGSSS





T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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