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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7rozA_

Fold library idPDB HeaderMoleculeTitle
c7rozA_3.10PDB header: transcriptionChain: A: PDB Molecule: rna-dependent rna polymerase 2;


Added to library: Sat Dec 11 08:40:06 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TNRSTVKISNVPQTIVADELLRFLELHLGEDTVFALEIPFARVQFTTLEVKSRAQLLSSQSKLLFKTHNL
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Known secondary structure (DSSP)

TT
S

SS

S
TT



SSTTTTTTT

TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence RLSEAYDDIIPRPVDPRKRLDDIVLTVGFPESDEKRFCALEKWDGVRCWILTEKRRVEFWVWESGDCYKI
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Known secondary structure (DSSP)


SB
S
SS


SSTTT

TTSSS
TTTT

TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence EVRFEDIIETLSCCVNGDASEIDAFLLKLKYGPKVFKRVTVHIATKFKSDRYRFCKEDFDFMWIRTTDFS
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Known secondary structure (DSSP)
SSS

S
TTSS

SS






S
STT
SS
S
TT


S



S
 .........220.........230.........240.........250.........260.........270.........280
Sequence GSKSIGTSTCFCLEVHNGSTMLDIFSGLPYYREDTLSLTYVDGKTFASAAQIVPLLNAAILGLEFPYEIL
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Known secondary structure (DSSP) TT
TTTT
S
S
S

SSSSSTTSSSB
SS
B


GGG



SS
TTS

S

SS

TTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence FQLNALVHAQKISLFAASDMELIKILRGMSLETALVILKKLHQQSSICYDPVFFVKTQMQSVVKSAYKRL
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Known secondary structure (DSSP) TTSS
SS
SSS

S
T




STTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence TEQNIMSCQRAYVTPSKIYLLGPELETANYVVKNFAEHVSDFMRVTFVEEDWSKLPANALSVNGFVKPSR
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Known secondary structure (DSSP) TTT

SS



GGGGGGB
SSSSB

B




S

B
 .........430.........440.........450.........460.........470.........480.........490
Sequence TNIYNRVLSILGEGITVGPKRFEFLAFSASQLRGNSVWMFASNEKVKAEDIREWMGCFRKIRSISKCAAR
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Known secondary structure (DSSP)

TT

T

SSS
TTTSS


 .........500.........510.........520.........530.........540.........550.........560
Sequence MGQLFSASRQTLIVRAQDVEQIPDIEVTTDGADYCFSDGIGKISLAFAKQVAQKCGLSHVPSAFQIRYGG
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Known secondary structure (DSSP) TTS



TTT

B



B


SSS

BSSSS
T
SS

S
STT
 .........570.........580.........590.........600.........610.........620.........630
Sequence YKGVIAVDRSSFRKLSLRDSMLKFDSNNRMLNVTRWTESMPCFLNREIICLLSTLGIEDAMFEAMQAVHL
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Known secondary structure (DSSP) B

SS

SS

B
STTB
S











T

 .........640.........650.........660.........670.........680.........690.........700
Sequence SMLGNMLEDRDAALNVLQKLSGENSKNLLVKMLLQGYAPSSEPYLSMMLRVHHESQLSELKSRCRILVPK
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Known secondary structure (DSSP) GGGTSGGGGTTTTTTTSS

TT
SS

TTTSS




SS
 .........710.........720.........730.........740.........750.........760.........770
Sequence GRILIGCMDEMGILEYGQVYVRVTLTKAELKSRDQSYFRKIDEETSVVIGKVVVTKNPCLHPGDIRVLDA
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Known secondary structure (DSSP)


SSTT

TT

S
S
TT
SSSS

SSS

STTS
 .........780.........790.........800.........810.........820.........830.........840
Sequence IYEVHFEEKGYLDCIIFPQKGERPHPNECSGGDLDGDQFFVSWDEKIIPSEMDPPMDYARLMDHDVTLEE
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Known secondary structure (DSSP)


TT


S
SSSSS
STT

TTT


TTTS
SS










TT


 .........850.........860.........870.........880.........890.........900.........910
Sequence IHKFFVDYMISDTLGVISTAHLVHADRDPEKARSQKCLELANLHSRAVDFAKTGAPAEMPYALKPREFPD
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Known secondary structure (DSSP) S

TTSSSSSSSTTTS






STTS
SSS
 .........920.........930.........940.........950.........960.........970.........980
Sequence FLERFEKPTYISESVFGKLYRAVKSSLAQTVAYDVTLEEAGFESFIETAKAHRDMYGEKLTSLMIYYGAA
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Known secondary structure (DSSP) SS

SSS


TTTTT



T

S




TT

S
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence NEEEILTGILDMKDRITLSVKDLHKEAMGWFEKSCEQQKKKLASAWYYVTYNPNHRDEKLTFLSFPWIVG
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Known secondary structure (DSSP) S

STTTT


TTTTTS




TTTTTTTTTSS


S
T
 .........1060....
Sequence DVLLDIKAENAQRQ
Predicted secondary structure


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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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