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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7rd6A_

Fold library idPDB HeaderMoleculeTitle
c7rd6A_3.25PDB header: translocaseChain: A: PDB Molecule: probable phospholipid-transporting atpase neo1;


Added to library: Sat Oct 2 09:35:20 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EREIHPDTTPVYDRNRYVSNELSNAKYNAVTFVPTLLYEQFKFFYNLYFLVVALSQAVPALRIGYLSSYI
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Known secondary structure (DSSP)

SS
TSSS

S







STTSTSSTTSGGG

S
TTTTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence VPLAFVLTVTMAKEAIDDIQRRRRDRESNNELYHVITRNRSIPSKDLKVGDLIKVHKGDRIPADLVLLQS
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Known secondary structure (DSSP)

TTT
S
TTT

TT

TTSB

SB
B
 .........150.........160.........170.........180.........190.........200.........210
Sequence SEPSGESFIKTDQLDGETDWKLRVACPLTQNLINRISITASAPEKSIHKFLGKVTYKDSTSNPLSVDNTL
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Known secondary structure (DSSP) SSSS
B
TTTSS

S


TTTS









S
TT


TTT
GGGB
 .........220.........230.........240.........250.........260.........270.........280
Sequence WANTVLASSGFCIACVVYTGRDTRQAMNTTTAKVKTGLLELEINSISKILCACVFALSILLVAFAGFHND
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Known secondary structure (DSSP)
TT
B

SSS


B
TTSSTS







TS
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence DWYIDILRYLILFSTIIPVSLRVNLDLAKSVYAHQIEHDKTIPETIVRTSTIPEDLGRIEYLLSDKTGTL
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Known secondary structure (DSSP)
TSSTT
SSS
S
S
TT
SSGGGS


SBTTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence TQNDMQLKKIHLGTVSYTSETLDIVSDYVQSLVKDMSFRVRDMILTLAICHNVTPTFEDDELTYQAASPD
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Known secondary structure (DSSP) B
S

TTSSS
GGG

SS



B

SSS
B


SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence EIAIVKFTESVGLSLFKRDRHSISLLHEHSGKTLNYEILQVFPFNSDSKRMGIIVRDEQLDEYWFMQKGA
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Known secondary structure (DSSP) T

SSSS

SS




TTT
TTT


 .........500.........510.........520.........530.........540.........550.........560
Sequence DTVMSKIVESNDWLEEETGNMAREGLRTLVIGRKKLNKKIYEQFQKEITKYLEHDLELLGLTGVEDKLQK
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Known secondary structure (DSSP) TTTS
S
SSTTT

T


STT
S

B



B
T
 .........570.........580.........590.........600.........610.........620.........630
Sequence DVKSSIELLRNAGIKIWMLTGDKVETARCVSISAKLISRGQYVHTITKVACLLIDGESLGMFLKHYEQEF
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Known secondary structure (DSSP) TTT

SS
TTSS
SS




B







 .........640.........650.........660.........670.........680.........690.........700
Sequence FDVVVHLPTVIACRCTPQQKADVALVIRKMTGKRVCCIGDGGNDVSMIQCADVGVGIVGKEGKQASLAAD
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Known secondary structure (DSSP) TTSS

S

S



SGGGSSS
SSS

TSS
 .........710.........720.........730.........740.........750.........760.........770
Sequence FSITQFCHLTELLLWHGRNSYKRSAKLAQFVMHRGLIIAICQAVYSICSLFEPIALYQGWLMVGYATCYT
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Known secondary structure (DSSP) SSSTTTSSS
STTTS
TTTTT
 .........780.........790.........800.........810.........820.........830.........840
Sequence MAPVFSLTLDHDIEESLTKIYPELYKELTEGKSLSYKTFFVWVLLSLFQGSVIQLFSQAFTSLLDTDFTR
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Known secondary structure (DSSP) T

SS
STTTTT
GGGGGGGSS

TT
T
SSSS
 .........850.........860.........870.........880.........890.........900.........910
Sequence MVAISFTALVVNELIMVALEIYTWNKTMLVTEIATLLFYIVSVPFLGDYFDLGYMTTVNYYAGLLVILLI
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Known secondary structure (DSSP) T
SS

TTTTSSTT





 .........920.........
Sequence SIFPVWTAKAIYRRLHPPS
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Known secondary structure (DSSP) S



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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