Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7rd0A_

Fold library idPDB HeaderMoleculeTitle
c7rd0A_2.40PDB header: peptide binding proteinChain: A: PDB Molecule: penicillin-binding protein;


Added to library: Tue Jun 21 23:28:22 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EKVELNSGRGIIYDRNNKKLTDTSKSQVLIVEKEKLNNNYKILELIKKATKMNDLDIYKAVQEQLTRPII
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP)
SS
SS


TTS
BSSS

T



TTT
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence QIQTKNIDKSMKKELEKNGIMVEEKTMRYAKDGLLSHTIGYIKEDDKSGQSGIEKSMDSVLRNSNEKYIS
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP)



TT

SS
SS
TT

B
TTT

B
STTTSS

 .........150.........160.........170.........180.........190.........200.........210
Sequence AFKTVDNKDKDRHLKTTIDYNIQKKLEQILNKEENPTAAIISEASTGEILAMCSRPNFDQNDISKSLKGK
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP)




S

TT

S

T

S
TTT
BS


TT

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence NGEFENRVIKATYPPGSVFKMVVLFSALENGVIDENYTYNCTGKTKVGNTNEILRCNKRDGHGFQNLRQA
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP) S
TT

TTTS

B

GGGGTS

TT

S
TTSS

SSSS

 .........290.........300.........310.........320.........330.........340.........350
Sequence FSNSCNPAFLDIAMKLGKEKILKSAEKLHLFEKVDIGLDEEKIREAPKNISIRNLAIGQENIEFTPLQIN
Predicted secondary structure







































SS confidence





































































Known secondary structure (DSSP) T
TT
TTTTS



S
TT






SS

T
SS

B
 .........360.........370.........380.........390.........400.........410.........420
Sequence QMTQIIANNGTFKPLYLYKSLVDNNMNTIKTYKSSKKEELISPYVCTQVKEYMKSVSRIGTAKDLKDIEG
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP) TTT


B

TT




SS



STTGGGTTSTT
 .........430.........440.........450.........460.........470.........480..
Sequence GCGVKTGTAQSSLNKKAIDHGWITGFYPEERPKYVITVLVEGTQKGNKSATPIFKEICESIK
Predicted secondary structure























SS confidence





























































Known secondary structure (DSSP)

TTSSSS



BTTB


ST


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D