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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7rczB_

Fold library idPDB HeaderMoleculeTitle
c7rczB_2.20PDB header: peptide binding proteinChain: B: PDB Molecule: stage v sporulation protein d (sporulation specific


Added to library: Tue Jun 21 20:25:34 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence IEPKRGTIYDRNMKELAVSVTKYTVWCKPVEVEDKKEAAEKVAEILDEDYKDIYALISKKNMALVKVKRW
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Known secondary structure (DSSP)







TT


GGG
SSTT

SST
SS
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence IDDDKASQIRDAKLSGIWVAEDNQRYYPYGNFAPYVLGHTSSDATGISGVEMQYDKKLKGKPPVQGNGLV
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Known secondary structure (DSSP)


TT
TTSSSS

TTS
T

B

B


 .........150.........160.........170.........180.........190.........200.........210
Sequence LSIDEVIQHYTEKAVQKAYELNNAKKVTAIAMNPKTGDILALASKPDYDPNDSRTPIYPYYQEELEKYND
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Known secondary structure (DSSP) S

TT
S
TTT
BS


GGGTTS

STTS
G
 .........220.........230.........240.........250.........260.........270.........280
Sequence KDKIKGYYQMWRNPAVSDTYEPGSTFKLITSSSALEEGVIKDGEKFTCTGSVTVGGRKIKCWRHYRPHGT
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Known secondary structure (DSSP) GGTS



B

GGGGT
S
TT

SSB

SSSS

B
TTTTS

 .........290.........300.........310.........320.........330.........340.........350
Sequence QEFKQAVQNSCNPVFVELGSRLGVGKMYDYIESFGLMDKTGIDLPGEAKGINVGPVELATISFGQSISVT
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Known secondary structure (DSSP)
TT
TTTTS



SSS







TTT
S

B
 .........360.........370.........380.........390.........400.........410.........420
Sequence PIQLITAISSIANGGDLMQPRVVKSYTDNKGNITETVKPKKVRSVISKETSKKMLEIAESVVTEGGGKIA
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Known secondary structure (DSSP) TTTT

BS
TTS





S
STTGGG
 .........430.........440.........450.........460.........470.........480.........490
Sequence YIPGYRLGGKTGTAQKVIDGKYAPGKYICSFVGIAPCDDPQIVVLAIVDEPTGVSAFGSTTAGPIVKEIM
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Known secondary structure (DSSP)

TTS

TT
TTS

S

SS


T
 .........500...
Sequence NDSLKYLGVKPVY
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Known secondary structure (DSSP) TT





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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