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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7rcyA_

Fold library idPDB HeaderMoleculeTitle
c7rcyA_3.00PDB header: peptide binding proteinChain: A: PDB Molecule: penicillin-binding protein;


Added to library: Wed Jun 22 03:26:52 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KLAIEAPRGEIKDRYGRLLAGNKNLFTVQVSGNDINKKDANKHSRANEISLKLINLLERNGEEYVDEFPI
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Known secondary structure (DSSP)







TT


T

SSSSS
STT






S
 .........80.........90.........100.........110.........120.........130.........140
Sequence YVENGKYYYTYDRDIREYKSENGIPNDYNAKESFYYLVDKLISAGILSQEDKRLDATRLQAKLNENGYYP
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Known secondary structure (DSSP) SSS
TT

TT

TTSS
SS
TT


 .........150.........160.........170.........180.........190.........200.........210
Sequence PILVSKWMFTAERDKRDWLASYKIKETKLSAKEAFEKVRNSDALEIDKSLSDEDARKIMVVRDLIKSKGY
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Known secondary structure (DSSP)
TTTTTTT
TT



TSTTT


SSS
TT
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence SQYNPVTIAKDVGETTIAQIEESAMDLVGVSIAVEPVRYYPNGSLASHMLGYVGKMPSTQIESYLQKGYE
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Known secondary structure (DSSP) S

S
SS

TTTTTTT
TTTTTT



GGGTT

 .........290.........300.........310.........320.........330.........340.........350
Sequence TGDMVGLAGVEKSNESRLRGTDGYKMVEIESKKPKSGDTVYLTLDKDLQEVSDNALKQIIEVASKGGTFK
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Known secondary structure (DSSP) SS

ST
B
B

B

S

B


S

SS

 .........360.........370.........380.........390.........400.........410.........420
Sequence SKFGDKPISAYAGKAQSAALIAIDVKNGEVLASSSYPNYDPNKFAKGISTEDYKALQPKNPNDLLAGSPL
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Known secondary structure (DSSP)
TT


SSSS



TTT
BS


GGGGTTT

SSS

TTS
TTS
TT
 .........430.........440.........450.........460.........470.........480.........490
Sequence LNLVTQGEFQPGSSFKMLTSMAALENGLDPNFTINDPGVIMLGKKSFGDYVWNHGRGNHGMTNLYKAIQE
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Known secondary structure (DSSP)



B


TTTTT

TT



SSSS

TS





 .........500.........510.........520.........530.........540.........550.........560
Sequence SCNIYMATIGTGKTWPDGKSIGIDMNANKILEYAKLFGLDQNTGLQDEVEERAGKVPSTEDKLKSTQAFA
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Known secondary structure (DSSP) T
TS
TTSSS

SS


TTSSS

S
TTTS











 .........570.........580.........590.........600.........610.........620.........630
Sequence KWSTADTFNLAIGQGENAYTPAQISRYVAAIANGGNLVELSVVDRAVSSDYSSVKINDQKKVEKIPFKNP
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Known secondary structure (DSSP) S

TT
SS

B
TTSB



BS
TTS
GGGS



B


S
G
 .........640.........650.........660.........670.........680.........690.........700
Sequence DNLKELTKGMKLVARQGTAKSAFADFPIDVAAKTGTAEKSGKIPTDNEYEYLKSHMSSYNVNLNDAIKLA
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Known secondary structure (DSSP) GGTSTTTT
SS




S



S
TTGGGT

 .........710.........720.........730.........740.........750.........760.........770
Sequence DKMKAEKEKELSLAKEKEIKKKLENKDLKDEERKKLEEELEDGVKVRLEDTDKVNSSYLRKAIKELNPKI
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Known secondary structure (DSSP) T
SS









SSTT
 .........780.........790.........800.........810.........820........
Sequence TDDQIDRFKQDYGSFTWTVAFAPADDPEIAVVCVIPQGDSSVFSLLPTREVIGTYMGL
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Known secondary structure (DSSP)
STTS


S
STTS

S


TTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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