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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7ra6D_

Fold library idPDB HeaderMoleculeTitle
c7ra6D_4.10PDB header: transcriptionChain: D: PDB Molecule: dead/deah box rna helicase;


Added to library: Sat Jul 17 11:13:03 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence IKVDELPVPEKFKEVLKSEGVRELLPVQSLAVKNGLLDGENLLVVSATASGKTLIGELAGVPKAMQGKKL
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Known secondary structure (DSSP)

GGGSSS
TTT




GGGTTTTT



TTTTTT

 .........80.........90.........100.........110.........120.........130.........140
Sequence LFLVPLVALANQKYEDFKRRYSKLGLRVAIRVGMSRIKTKDELVVVDTGIDADIIVGTYEGIDYLLRAGR
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Known secondary structure (DSSP)


SSSSGGGT







S

SS







TTSS

STS

 .........150.........160.........170.........180.........190.........200.........210
Sequence KIGNVGTIVIDEIHTLDDEERGPRLDGLIARLRKLYPKAQFIGLSATVGNPDELAKELGLKLVLYDERPV
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Known secondary structure (DSSP)


S


B

S

TTSSSTTT

SS
B




S







S
 .........220.........230.........240.........250.........260.........270.........280
Sequence DLERHIIIVRNESEKWRHIANLCRAEAMRKSKQGYKGQSIVFTFSRKRTHELAAYLTSKGLKAKPYHSGL
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Known secondary structure (DSSP)









TTTTT


TTS




SS
TSS





SSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence PYKQRKLTEMEFLAQRLDVVVTTAALGAGVDFPASQVIFESLAMGNKWLSVREFHQMLGRAGRPLYHEKG
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Known secondary structure (DSSP)
TS



S

S
S




SS
S
SSSS


TTS
S
TTT
S

 .........360.........370.........380.........390.........400.........410.........420
Sequence KVYLLVEPGRKYSAQMEGTEDEVAFKLLTAPIEPVQVEWSDELEQDNVLAHSCVFNRLDVIEEVQSMCLG
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Known secondary structure (DSSP)
B




SS
S

SSS
SSSS


S
SS


SS
TTTS
SSS


SSSSTT
S
 .........430.........440.........450.........460.........470.........480.........490
Sequence ANQSAEKVLEKLEEFDFVKMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) SSS
GGGG




SS

TTSTTTS
S

SSGGGSS







S


SS


SSS
TS
T
 .........500.........510.........520.........530.........540.........550.........560
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) GGGG
S
TTSS
SSS
GGGTT
GGGGTT




GGG
 .........570.........580.........590.......
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) STTTTTTTTSS

SSSTTTTTTTTTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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