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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7r8qA_

Fold library idPDB HeaderMoleculeTitle
c7r8qA_2.00PDB header: ligaseChain: A: PDB Molecule: atp-grasp domain-containing protein;


Added to library: Sat Sep 17 09:02:03 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NLTLSDLYDKDVVYTSRPSYISNPWLKPDEHQSNFLTGRELLIANQLPVIVHEASATDKLHQLFQVIGKE
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Known secondary structure (DSSP)


GGGTS
TT



SS
BTTB


TTTTTTS
GGGSSTT

 .........80.........90.........100.........110.........120.........130.........140
Sequence VPNSIYTFNNQQSYENLIKQLAHKENKKIYFQYIHDETILNQQYYALDKTLFVALNNKARIPEWTNGKFL
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Known secondary structure (DSSP)

S

STS

SS


TTTS
GGGBSS
T
GGGTTT
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence PKRKVVKIEQFENEIKNWEFPLVIKPGDDLPTAGGYGVMICYHDADLQKAITRIKEATAETNSLIIEQKI
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Known secondary structure (DSSP)
SGGGTT

SS
SS



TTTT
SSTGGG
S

 .........220.........230.........240.........250.........260.........270.........280
Sequence EEKANYCVQFAYSESLGIQYLGAATQLTDKYGFYNGNENTTNVPEHVIEAGRQIMENGVNQGFFGVAGFD
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Known secondary structure (DSSP)

STTT
TT


S


TTT

 .........290.........300.........310.........320.........330.........340.........350
Sequence LLVDEDDNVYAIDLNFRQNGSTSMLLLANELNSGYQKFYSYHSKGDNTHFFNTILKYVKEGSLYPLSYYD
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Known secondary structure (DSSP)
TT


S

TGGGS
SS

S
TSS
 .........360.........370.........380.......
Sequence GDWYGEDKVKSRFGCIWHGDSKETVLENERAFLAELE
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Known secondary structure (DSSP) GGGGSTTSS

S
T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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