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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7r4rB_

Fold library idPDB HeaderMoleculeTitle
c7r4rB_3.90PDB header: viral proteinChain: B: PDB Molecule: spike glycoprotein;


Added to library: 3.90
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVTKRFDNPVLPFND
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Known secondary structure (DSSP)




S








B
S


B

S




S



TTB






TT





SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence GVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFR
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SSS
SSSSSSS


TTS





SS

TTTT



 .........150.........160.........170.........180.........190.........200.........210
Sequence VYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPLVD
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Known secondary structure (DSSP) S




S















S


TT


SSS


S


B
 .........220.........230.........240.........250.........260.........270.........280
Sequence LPIGINITRFQTLLALHRSGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCT
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TTTSB


S




SSSS





TTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence LKSFTVEKGIYQTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSA
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TTT
S



GGG

SS


T
 .........360.........370.........380.........390.........400.........410.........420
Sequence SFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLD
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Known secondary structure (DSSP)
SSB

SS
GGGSSS
S
SGGGGG
STT

ST



TT


 .........430.........440.........450.........460.........470.........480.........490
Sequence SKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVV
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Known secondary structure (DSSP)

TT
BTTS


SS


TT







B

SSS





BTTBB



B
TTS
TTTS
 .........500.........510.........520.........530.........540.........550.........560
Sequence LSFELLPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRILDITPC
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S








SS
TT



S


TT
S

GGGSS






 .........570.........580.........590.........600.........610.........620.........630
Sequence SFGGVSVITPGTNTSNQVAVLYQDVNCTEVNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYSIIAYT
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TTT
S


SS
TT




SS

SS


S


SS

BTT


 .........640.........650.........660.........670.........680.........690.........700
Sequence MSLGAENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRA
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TT

S






TSS
TT
S
 .........710.........720.........730.........740.........750.........760.........770
Sequence LTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSFIEDLLFNKVTLFNGLTVLP
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Known secondary structure (DSSP) TT
SS




S


SSS


TTTS

TT
STT

T




S


 .........780.........790.........800.........810.........820.........830.........840
Sequence PLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANc7r4rB_
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Known secondary structure (DSSP)
SS
TTTTTSSS




ST

S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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