Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7r0kA_

Fold library idPDB HeaderMoleculeTitle
c7r0kA_2.97PDB header: viral proteinChain: A: PDB Molecule: dna polymerase i;


Added to library: Sat Nov 5 10:49:19 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RSYHVVTNDTLPSALDAIAQAPRVALDTETYGSNPFNLYLPDFRLVGVAIATSPTEAWYFPVDHQDFLLR
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP)


TTT
SS
SSTT
TTSTT
TTSS


SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence YQPANLPREAVRQAVLEALKRPVVYHNAAYDRRVLAVTLDIPLDQTYGDDTMVALHLVDENHPLGLKEWA
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP)






S
SS





TTS


 .........150.........160.........170.........180.........190.........200.........210
Sequence KTLLGLEEVNADIEPPELTDVHKLKPDWLQRLKDAFLAVHNGGVSYSALYKLLNRAFQQLKNRGVVSYTG
Predicted secondary structure










































SS confidence





































































Known secondary structure (DSSP) T



B
S






B


SB
TTTT
SS
B
TTS


SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence SFPNDFRLFPVDIAAIYALDDAMNTLALWEHVEVFFELHPKLHALYREIELPVNDVMTRATHRGVLVDKE
Predicted secondary structure

















SS confidence





































































Known secondary structure (DSSP) S



GGGS

T

 .........290.........300.........310.........320.........330.........340.........350
Sequence ELRRIKETIQARIEEKAQEAQELLKALIGSKASEFTNPLNSPQQLSTILYDLLGYPVVETTPNGAPSTSK
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP) GGGGGG
S
TTT
TTTT





B
TTSSB


 .........360.........370.........380.........390.........400.........410.........420
Sequence TAIAKLLTLSPKDKRKAPLAKAFLEAKQAHEGLKKLLSTYTDSILEEVDPQGRLHTNFNTVGTVSGRMSS
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP) TTS

SSTTSTSTTTSS

TTS

TT
SSSS

 .........430.........440.........450.........460.........470.........480.........490
Sequence SNPNLQNLPRLLPEEVAEKPYLQGIDIRKAFVADPGYTFVSADYASMELVVCAAVSGDPTMRDLLNQGRD
Predicted secondary structure










































SS confidence





































































Known secondary structure (DSSP) SS
GGGS



SGGGTT

GGGG

TTTT

TT

 .........500.........510.........520.........530.........540.........550.........560
Sequence LHAYTARYAFKVGLDLDDKAFKEQYKDYRQKAKVVNFALIYGGTEFTLIKNFGFSEEEAKQLIQGYFEAY
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP) S


TTS
TSTT





S
 .........570.........580.........590.........600.........610.........620.........630
Sequence PVVKTWMEEVYRELEEKGFVEYPIYGYIKRMDLPQALRKLPKDKWPLVLNNDPDARKQYYASLRSCQNAL
Predicted secondary structure
































SS confidence





































































Known secondary structure (DSSP) TS
TTT





TTTTT

GGG
 .........640.........650.........660.........670.........680.........690.........700
Sequence IQGFSAFVVKDAIVQMQRAFEAEGLDAQVIIQVHDEIVVLAKEEHAERVAQIMVEKMEREVNGVLLKAEP
Predicted secondary structure















SS confidence





































































Known secondary structure (DSSP) TT
S
SSTTT

TT

 ........
Sequence EFKRTLSK
Predicted secondary structure







SS confidence







Known secondary structure (DSSP) SBS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D