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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7r08F_

Fold library idPDB HeaderMoleculeTitle
c7r08F_3.10PDB header: antiviral proteinChain: F: PDB Molecule: reverse transcriptase;


Added to library: Sat Sep 10 09:45:27 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MKKVYELTSEEALSYFLRHDSYTTLELPAYINFTTLLNDINSSIHNKKIKIEPTAKELMGKDINYEVLVS
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Known secondary structure (DSSP)

BSTTS
TS

S


TTB
TTTSS




TT
B
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence KDGLYSWRRITLINPLYYVYFCRKITAPATWEIITEKFKSFESNDLFTCSSIPVRKDNWWEDFEQKSLAL
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Known secondary structure (DSSP)
SSTT



TST
TTS
S
B






G
 .........150.........160.........170.........180.........190.........200.........210
Sequence ALEYEFMFSTDISNFYPSIYTHSFEWVFISNPGGLIDSHIQMMMNNGIPLGSTLMDTFAELILGQIDIEL
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Known secondary structure (DSSP) GGT
SBTTTTTT

GGGGGTTT


TTB


S
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence RKKTNELKIINYKVVRYRDDYRIFSNSKDDLDIISKCLVNVLGDFGLDLNSKKTELYEDIILHSLKQAKK
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Known secondary structure (DSSP) TT

STTS
TT

B
SSS
S
TTTTSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence DYIKEKRHKSLQKMLYSIYLFSLKHPNSKTTVRYLNDFLRNLFKRKTIKDNGQQVDAMLGIISSIMAKNP
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Known secondary structure (DSSP) T



SSSTT
TT
S

TTTT
G
 .........360.........370.........380.........390.........400.........410.........420
Sequence TTYPVGTAIFSKLLSFLYGDDTQKKLTKLEQLHKKLDKQPNTEMLDIWFQRTQAKINLEWSYKSALCVRI
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Known secondary structure (DSSP) GGSTT
TTSS

TT






S
 .........430.........440.........450.........460.........470.........
Sequence NDELTKEFSVNNLWNIDWIQGKTSPNKAKILSLLRKTKIVDTDKFDKMDDNITPEEVNL
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Known secondary structure (DSSP)




TTTS

TTSS



S
SB
TTS
SS




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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