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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7qvgN_

Fold library idPDB HeaderMoleculeTitle
c7qvgN_3.30PDB header: plant proteinChain: N: PDB Molecule: 26s proteasome non-atpase regulatory subunit 1 homolog;


Added to library: Sat Aug 20 09:01:37 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AGGMLAMLSEHSTSLKLHALSNLNVYAQFLWPEISTSIPLLESLYEDEEFSQRPLAALVVSKVFYFLGEL
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Known secondary structure (DSSP)
SS
TGGG
TT
TTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence NDSLAYALGAGSLFDVSEDSDYVRTLLDKAIDEYASLRNKSAESKEEAVNIDPRLEAIVERMLEKCILDG
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Known secondary structure (DSSP) TGGGS
TT



TT





TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence RYQQAMGMAIECRRLDKLEEAIMRSDNAPGSLAYCINVSHSYVNRREYRQEVLRLLVRVYQKLPSPDYLS
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Known secondary structure (DSSP)
TT

TT


SSS

 .........220.........230.........240.........250.........260.........270.........280
Sequence ICQCLMFLDQPEAVASILEKLLRAEKLEDTLLSFQIAFDLVENEHQAFLLNVRDRLSERLTKIKGILSGE
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Known secondary structure (DSSP) TT

S
TT



T
 .........290.........300.........310.........320.........330.........340.........350
Sequence TSIQLTLQFLYSHNKSDLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWA
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Known secondary structure (DSSP) T



S
TT
TTTS


TTT

T
 .........360.........370.........380.........390.........400.........410.........420
Sequence KFSATAGLGVIHRGHLQQGRSLMAPYLPQGGAGGGGSPYSEGGALYALGLIHANHGEGIKQFLRDSLRST
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Known secondary structure (DSSP) TTT
TTTTTTS

SSTT



TTT

TTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence NVEVIQHGACLGLGLAALGTADEDVFEDIKNVLYTDSAVAGEAAGISMGLLMVGTASEKAGEMLAYAHET
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Known secondary structure (DSSP)

TTT


TTT
TTT


T
 .........500.........510.........520.........530.........540.........550.........560
Sequence QHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILRYGGMYALALAYRGTSNNKAIRQLLHFAVSD
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Known secondary structure (DSSP)

TTT
GGGGT
S
STT



 .........570.........580.........590.........600.........610.........620.........630
Sequence VSDDVRRTAVLALGFVLYSEPEQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGLSEAISLLEPLTSDV
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Known secondary structure (DSSP) S
TTSTTT
S
TTTT

T
S
 .........640.........650.........660.........670.........680.........690.........700
Sequence VDFVRQGALIAMAMVMVQITEAMDSRVGTFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLL
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Known secondary structure (DSSP) STTT

TTT
T
SSS
TGGGGT
SB
 .........710.........720.........730.........740.........750.........760.........770
Sequence SKSKHDKITAVVGLAVFSQFWYWYPLIYFISLAFSPTAFVGLNYDLKVPKFDFLSHAKPSLFEYPKPTTA
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Known secondary structure (DSSP)
TTS
B
TTTTT
GGGGGGGGGG

TTS




B

S
GGGG







 .........780.........790.........800.........810......
Sequence EPCFETITNPARVVPAQEKFIKFLEGSRYMPVKLAASGFVLLKDLR
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Known secondary structure (DSSP)



B

BSS

TTTGGG

TT
SSS

SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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