PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c7qvef_

Fold library id	PDB Header	Molecule	Title
c7qvef_	3.30	PDB header: plant protein	Chain: F: PDB Molecule: proteasome subunit alpha type;

Links to external resources
Added to library: Wed Jun 22 01:32:10 2022

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence N W S P Y D F N G G T C V A V A G A D Y C V I A A D T R M S T G Y N I L T R D Y S K I C K L A E K S V L A S S G F Q A D V R A L Q K H L D A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
B
S S
T T S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R H L I Y Q H Q H N K Q M S C P A M A Q L L S N T L Y Y K R F F P Y Y A F N V L G G L D N E G K G C V F T Y D A V G S Y E K V G Y S S Q G S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
T T T S
T T S
T T
S T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence G A K L I M P F L D N Q L K S P S P L L I P A Q D A V T P L S E S E A I D L V R T A F A S A T E R D I Y T G D K L E I L V L N K E G L R R E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
T T
S S
T T
S S S
S
T T

. . . . . . .

Sequence Y M E L R L D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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Phyre2 is part of Genome3D

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	N	W	S	P	Y	D	F	N	G	G	T	C	V	A	V	A	G	A	D	Y	C	V	I	A	A	D	T	R	M	S	T	G	Y	N	I	L	T	R	D	Y	S	K	I	C	K	L	A	E	K	S	V	L	A	S	S	G	F	Q	A	D	V	R	A	L	Q	K	H	L	D	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S												B		S	S													T	T					S										T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	H	L	I	Y	Q	H	Q	H	N	K	Q	M	S	C	P	A	M	A	Q	L	L	S	N	T	L	Y	Y	K	R	F	F	P	Y	Y	A	F	N	V	L	G	G	L	D	N	E	G	K	G	C	V	F	T	Y	D	A	V	G	S	Y	E	K	V	G	Y	S	S	Q	G	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S	S																		T	T	T	S													T	T	S									T	T							S						T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	A	K	L	I	M	P	F	L	D	N	Q	L	K	S	P	S	P	L	L	I	P	A	Q	D	A	V	T	P	L	S	E	S	E	A	I	D	L	V	R	T	A	F	A	S	A	T	E	R	D	I	Y	T	G	D	K	L	E	I	L	V	L	N	K	E	G	L	R	R	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T												S					T	T		S	S																										T	T		S	S	S		S									T	T
	.	.	.	.	.	.	.
Sequence	Y	M	E	L	R	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)