PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c7qvec_

Fold library id	PDB Header	Molecule	Title
c7qvec_	3.30	PDB header: plant protein	Chain: C: PDB Molecule: proteasome subunit alpha type;

Links to external resources
Added to library: Wed Jun 22 03:33:27 2022

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S I F E Y N G S A T V A M V G K N C I A I G S D R R L G V Q L Q T I A T D F Q R I F Q I H D R L F I G L S G L G S D A Q T L Y Q R L V F R H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T
S S
S S S S S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence K L Y Q L R E E R D M K P E T F A N L V S A I L Y E K R F G P Y F C Q P V I A G L G D D N K P F I C T M D S I G A K E L A K D F V V A G T A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
T T T S
S
S S S
T T
S S T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . .

Sequence S E S L Y G A C E S M Y K P D M E P E E L F E T V S Q A L Q A S V D R D C L S G W G G H V Y I V T P T E I K E H I L K G R M D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T T
T T S
S S T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	I	F	E	Y	N	G	S	A	T	V	A	M	V	G	K	N	C	I	A	I	G	S	D	R	R	L	G	V	Q	L	Q	T	I	A	T	D	F	Q	R	I	F	Q	I	H	D	R	L	F	I	G	L	S	G	L	G	S	D	A	Q	T	L	Y	Q	R	L	V	F	R	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T	T										S	S												S	S	S	S				S										T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	L	Y	Q	L	R	E	E	R	D	M	K	P	E	T	F	A	N	L	V	S	A	I	L	Y	E	K	R	F	G	P	Y	F	C	Q	P	V	I	A	G	L	G	D	D	N	K	P	F	I	C	T	M	D	S	I	G	A	K	E	L	A	K	D	F	V	V	A	G	T	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S																		T	T	T	S			S										S	S	S									T	T							S	S						T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Sequence	S	E	S	L	Y	G	A	C	E	S	M	Y	K	P	D	M	E	P	E	E	L	F	E	T	V	S	Q	A	L	Q	A	S	V	D	R	D	C	L	S	G	W	G	G	H	V	Y	I	V	T	P	T	E	I	K	E	H	I	L	K	G	R	M	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														S	S			T	T																T		T	T	S		S	S								T	T