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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7qolA_

Fold library idPDB HeaderMoleculeTitle
c7qolA_3.33PDB header: virusChain: A: PDB Molecule: portal protein gp20;


Added to library: Sat Apr 1 12:18:22 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NFPRQMLPFSKKTKQWRKDCLLWANQKNYSLVRKSVIHKKINYDLLNGRLHMSDLELVLIKAAYIPDRLQ
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Known secondary structure (DSSP)





S
GGG





SSS

TT


GGGSS




SS
TTTS

 .........80.........90.........100.........110.........120.........130.........140
Sequence HYPIMNSKLNVLRGEESKRVFDFKVVVTNPNAISEIEDNKKNELLQRLQEMITDTSISEDEYNIKLEKLN
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Known secondary structure (DSSP)



SS



SSTT


S
TTSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence DYYTYEWQDIREVRANELLNHYIKEYDIPLIFNNGFMDAMTCGEEIYQCDIVGGEPVIERVNPLKIRIFK
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Known secondary structure (DSSP) GGGG

TSTT

GGGS
 .........220.........230.........240.........250.........260.........270.........280
Sequence SGYSNKVEDADMIILEDYWSPGRVIDTYYDVLSPKDIKYIETMPDYAGNLRVLRLYWKSKRKILKVKSYD
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Known secondary structure (DSSP)

S
SBSTT
S
TTT

S






 .........290.........300.........310.........320.........330.........340.........350
Sequence PETGEEEWNFYPENYVVNKEAGEEVQSFWVNEAWEGTMIGNEIFVNMRPRLIQYNRLNNPSRCHFGIVGS
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Known secondary structure (DSSP) SSS

TT



TTTT
B

TTT
S


B
SS
TT



S
 .........360.........370.........380.........390.........400.........410.........420
Sequence IYNLNDSRPFSLVDMMKPYNYLYDAIHDRLNKAIASNWGSILELDLSKVPKGWDVGKWMYYARVNHIAVI
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SSSS











TTS
TT

S



 .........430.........440.........450.........460.........470.........480.........490
Sequence DSFKEGTIGASTGKLAGALNNAGKGMIETNIGNYIQQQINLLEFIKMEMADVAGISKQREGTLQSSHITE
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Known secondary structure (DSSP)
TT
GGGTSS
GGGG
S





T



 .........500.........510.........520.........530.........540.........550.........560
Sequence WLFTIHDDVKKRALECFLETAKVALKGRNKKFQYILSDTSTRVMEIDGDEFAEADYGLVVDNSNGTQELQ
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Known secondary structure (DSSP) TTT
TTS
GGGSTTTTB
GGGGT
S
 .........570.........580.........590.........600.........610.........620.........630
Sequence QKLDTLAQAALQTQTLSFSTITKLYTSSSLAEKQRLIEKDEKQIRERQAQAQKEQLEAQQQIAAMQQQQK
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Known secondary structure (DSSP) TTT
S
T


 .........640.........650.......
Sequence EAELLQKEEANIRDNQTKIIIAQIQSE
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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