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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7qo3V_

Fold library idPDB HeaderMoleculeTitle
c7qo3V_6.10PDB header: motor proteinChain: V: PDB Molecule: ubiquitin carboxyl-terminal hydrolase rpn11;


Added to library: Wed Jun 22 00:52:41 2022
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence TGRDDTKETVYISSIALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVNVVDVFAMPQSGTGVSVEAVDDVF
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TTS

TTT


TT
SSTTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence QAKMMDMLKQTGRDQMVVGWYHSHPGFGCWLSSVDVNTQKSFEQLNSRAVAVVVDPIQSVKGKVVIDAFR
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Known secondary structure (DSSP) TTT



SS

S


TT
TT
TTS
SSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence LIDTGALINNLEPRQTTSNTGLLNKANIQALIHGLNRHYYSLNIDYHKTAKETKMLMNLHKEQWQSGLKM
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Known secondary structure (DSSP)

T
SGGGGSS

S



S

SST


S
STTSSSSS

 .........220.........230.........240.........250.........260.........270.........280
Sequence YDYEEKEESNLAATKSMVKIAEQYSKRIEEEKELTEEELKTRYVGRQDPKKHLSETADETLENNIVSVLT
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TTS

SS
TT
TT
 .........
Sequence AGVNSVAIK
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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