Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7qh5A_

Fold library idPDB HeaderMoleculeTitle
c7qh5A_2.20PDB header: transcriptionChain: A: PDB Molecule: rna polymerase sigma factor;


Added to library: Sat Dec 24 13:50:51 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AETIRTGGEEVFAALAERYRHELRVHLYRMLGSFTDAEDLVQETLLKAWRRRETFEGRAGFRAWLYRIAT
Predicted secondary structure











SS confidence





































































Known secondary structure (DSSP)

SS
STTTTTS
S
TT

SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence NTALDFLGGPARNREVASALAEVSWLQPYPDRLLDLAAPAAIARETVELAFLAVIQHLPPRQRAVLILRD
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP) TTTTT





GGG
TT



BGGG





GGGT
TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence IAGWSAQETADALDMTVASVKSALQRARTTLRGRLPERRSEWGAATEPSAAERSLLRRYMAASRDADLSA
Predicted secondary structure

















SS confidence





































































Known secondary structure (DSSP) TS


TT

BTTB




SS

TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence LALLLREDARQAMPPHRLVFDGRDAILDLWRPVLEGDTAWGEWRSVPYAVNRQPAAVSYVRRAGETLFTA
Predicted secondary structure

































SS confidence





































































Known secondary structure (DSSP) GGGTSSGGG



BTTB
TT
SS
 .........290.........300.........310...
Sequence VNVDVLTVVDGLIAEITTFDPGLLPGIAPTLAE
Predicted secondary structure







SS confidence
































Known secondary structure (DSSP) TT
STTSSS

S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D