Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7qdrB_

Fold library idPDB HeaderMoleculeTitle
c7qdrB_3.70PDB header: rna binding proteinChain: B: PDB Molecule: tetratricopeptide repeat protein 37;


Added to library: Sat Feb 5 10:19:47 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LHLKAEALIKLSDYDSSEEAIRTLDQISDADNIPGLLVLKSLAYRNKGSFDEAAKIMEDLLSSYPDLAEV
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP)

T

ST

S
GGGTT
SSS

S

 .........80.........90.........100.........110.........120.........130.........140
Sequence HALEALIHFTKKDYLQAEKCFQRALEKDTEVAEYHYQLGLTYWFMGEETRKDKTKALTHFLKAARLDTYM
Predicted secondary structure












SS confidence





































































Known secondary structure (DSSP) S
TS

SSTSS


TTTTT

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence GKVFCYLGHYYRDVVGDKNRARGCYRKAFELDDTDAESGAAAVDLSVELEDMEMALAILTTVTQKASAGT
Predicted secondary structure













SS confidence





































































Known secondary structure (DSSP) SSSSTSS
S
S
S
SSSS

TTT

SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence AKWAWLRRGLYYLKAGQHSQAVADLQAALRADPKDFNCWESLGEAYLSRGGYTTALKSFTKASELNPESI
Predicted secondary structure












SS confidence





































































Known secondary structure (DSSP)
TT

TT
SS
SSSTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence YSVFKVAAIQQILGKYKEAVAQYQMIIKKKEDYVPALKGLGECHLMMAKAALVDYLDGKAVDYIEKALEY
Predicted secondary structure










SS confidence





































































Known secondary structure (DSSP) TS

S

TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence FTCALQHRADVSCLWKLAGDACTCLYAVAPSKVNVHVLGVLLGQKEGKQVLKKNELLHLGGRCYGRALKL
Predicted secondary structure











SS confidence





































































Known secondary structure (DSSP)



TT
SS
SSS


SGGGSS

S

 .........430.........440.........450.........460.........470.........480.........490
Sequence MSTSNTWCDLGINYYRQAQHLAETGSNMNDLKELLEKSLHCLKKAVRLDSNNHLYWNALGVVACYSGIGN
Predicted secondary structure













SS confidence





































































Known secondary structure (DSSP) S

TTS
SSSS
TT
TSTTT

 .........500.........510.........520.........530.........540.........550.........560
Sequence YALAQHCFIKSIQSEQINAVAWTNLGVLYLTNENIEQAHEAFKMAQSLDPSYLMCWIGQALIAEAVGSYD
Predicted secondary structure















SS confidence





































































Known secondary structure (DSSP)
S

TT

TT
TT
S
 .........570.........580.........590.........600.........610.........620.........630
Sequence TMDLFRHTTELNMHTEGALGYAYWVCTTLQDKSNRETELYQYNILQMNAIPAAQVILNKYVERIQNYAPA
Predicted secondary structure
















SS confidence





































































Known secondary structure (DSSP)


TT
TTSSSTT


 .........640.........650.........660.........670.........680.........690.........700
Sequence FTMLGYLNEHLQLKKEAANAYQRAILLLQTAEDQDTYNVAIRNYGRLLCSTGEYDKAIQAFKSTPLEVLE
Predicted secondary structure












SS confidence





































































Known secondary structure (DSSP) T
TTTTT
SSS
SS


S
 .........710.........720.........730.........740.........750.........760.........770
Sequence DIIGFALALFMKGLYKESSKAYERALSIVESEQDKAHILTALAITEYKQGKTDVAKTLLFKCSILKEPTT
Predicted secondary structure















SS confidence





































































Known secondary structure (DSSP) S
S

STTTS
TSSS

S
 .........780.........790.........800.........810.........820.........830.........840
Sequence ESLQALCALGLAMQDATLSKAALNELLKHIKHKDSNYQRCLLTSAIYALQGRSVAVQKQISKAVHSNPGD
Predicted secondary structure











SS confidence





































































Known secondary structure (DSSP) SSSS
S






STT

S
S

 .........850.........860.........870.........880.........890.........900.........910
Sequence PALWSLLSRVVAQYAQRNAKGGVVAGNVAHILDSNHGKKALLYTAVNQLAMGSSSAEDEKNTALKTIQKA
Predicted secondary structure















SS confidence





































































Known secondary structure (DSSP) S
TT
T
STT
S
S


TT
S
 .........920.........930.........940.........950.........960.........970.........980
Sequence ALLSPGDPAIWAGLMAACHADDKLALVNNTQPKRIDLYLALLSAVSASIKDEKFFENYNQSLEKWSLSQA
Predicted secondary structure











SS confidence





































































Known secondary structure (DSSP)
TT
TS




S
T

S
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence VTGLIDTGRISEAETLCTKNLKSNPDQPAVILLLRQVQCKPLLESQKPLPDAVLEELQKTVMSNSTSVPA
Predicted secondary structure













SS confidence





































































Known secondary structure (DSSP) T
SS

TTTTTBTTB




S
S
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence WQWLAHVYQSQGMMRAAEMCYRKSLQLASQRGSWSGKLSSLLRLALLALKVCMANISNDHWPSLVQEATT
Predicted secondary structure








SS confidence





































































Known secondary structure (DSSP)

TT
STT
SSTT
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence EALKLCFCPLAVLLQALLQFKRKMGARETRRLLERVVYQPGYPKSIASTARWYLLRHLYAKDDYELIDVL
Predicted secondary structure

















SS confidence





































































Known secondary structure (DSSP)


SS

SSSS

S

 .........1200.........1210..
Sequence VNNAKTHGDTRALELNQRLSSQ
Predicted secondary structure







SS confidence





















Known secondary structure (DSSP) TS

SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D