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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7qcdA_

Fold library idPDB HeaderMoleculeTitle
c7qcdA_8.00PDB header: recombinationChain: A: PDB Molecule: structural maintenance of chromosomes protein 5;


Added to library: Sat Sep 24 15:00:01 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SSFQPGSIIKIRLQDFVTYTLTEFNLSPSLNMIIGPNGSGKSTFVCAVCLGLAGKPEYIGRSKKVEDFIK
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Known secondary structure (DSSP)

S
TT

TT


SS



B


SS
TTT

GGGT
S


GGGGB
 .........80.........90.........100.........110.........120.........130.........140
Sequence NGQDVSKIEITLKNSPNVTDIEYIDARDETIKITRIITRSKRRSDYLINDYQVSESVVKTLVAQLNIQLD
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Known secondary structure (DSSP) TT
S

TT

SBTTB
TT

TT
SS
BBTS

TT

SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence NLCQFLSQERVEEFARLKSVKLLVETIRSIDASLLDVLDELRELQGNEQSLQKDLDFKKAKIVHLRQESD
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Known secondary structure (DSSP)
TTT


TTS

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence KLRKSVESLRDFQNKKGEIELHSQLLPYVKVKDHKEKLNIYKEEYERAKANLRAILKDKKPFANTKKTLE
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Known secondary structure (DSSP) T
 .........290.........300.........310.........320.........330.........340.........350
Sequence NQVEELTEKCSLKTDEFLKAKEKINEIFEKLNTIRDEVIKKKNQNEYYRGRTKKLTIISTKEDFLRSQEI
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Known secondary structure (DSSP) TTT



 .........360.........370.........380.........390.........400.........410.........420
Sequence LAQTEKSVFEDIDIKRKEIINKEGEIRDLISEIDAKANAINHEMRSIQRQAESKTKSLTTTDKIGILNQD
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Known secondary structure (DSSP)

S
TT
SGGGS
 .........430.........440.........450.........460.........470.........480.........490
Sequence QDLKEVRDAVLMVREHPEMKDKILEPPIMTVSAINAQFAAYLAQCVDYNTSKALTVVDSDSYKLFANPIL
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Known secondary structure (DSSP)
TSB



SSS
SSS
TTTT
 .........500.........510.........520.........530.........540.........550.........560
Sequence DKFKVNLRELSSADTTPPVPAETVRDLGFEGYLSDFITGDKRVMKMLCQTSKIHTIPVSRRELTPAQIKK
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Known secondary structure (DSSP) TTS





S

S
SS
TTT

TTTT

TT
GGGS
SS


 .........570.........580.........590.........600.........610.........620.........630
Sequence LITPRPNGKILFKRIIHGNRLVDIKQSAYGSKQVFPTDVSIKQTNFYQGSIMSNEQKIRIENEIINLKNE
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Known secondary structure (DSSP) S

TTSS
S
S
TT


SSTT








TT





 .........640.........650.........660.........670.........680.........690.........700
Sequence YNDRKSTLDALSNQKSGYRHELSELASKNDDINREAHQLNEIRKKYTMRKSTIETLREKLDQLKREARKD
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Known secondary structure (DSSP) TTS
 .........710.........720.........730.........740.........750.........760.........770
Sequence VSQKIKDIDDQIQQLLLKQRHLLSKMASSMKSLKNCQKELISTQILQFEAQNMDVSMNDVIGFFNEREAD
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Known secondary structure (DSSP) T
 .........780.........790.........800.........810.........820.........830.........840
Sequence LKSQYEDKKKFVKEMRDTPEFQSWMREIRSYDQDTKEKLNKVAEKYEEEGNFNLSFVQDVLDKLESEIAM
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Known secondary structure (DSSP) TT
S
T

SS
 .........850.........860.........870.........880.........890.........900.........910
Sequence VNHESAVTILDQVTAELRELEHTVPQQSKDLETIKAKLKEDHAVLEPKLDDIVSKISARFARLFNNVGSA
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Known secondary structure (DSSP) S


T
 .........920.........930.........940.........950.........960.........970.........980
Sequence GAVRLEKPKDYAEWKIEIMVKFRDNAPLKKLDSHTQSGGERAVSTVLYMIALQEFTSAPFRVVDQINQGM
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Known secondary structure (DSSP)

SSGGG


TTS


SSSS
SS


STTTT
 .........990.........1000.........1010.........1020........
Sequence DSRNERIVHKAMVENACAENTSQYFLITPKLLTGLHYHEKMRIHCVMA
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Known secondary structure (DSSP)
SSS


BS


S




SS








Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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