PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c7q97B_

Fold library id	PDB Header	Molecule	Title
c7q97B_	3.30	PDB header: toxin	Chain: B: PDB Molecule: rhs family protein;

Links to external resources
Added to library: Sat Dec 25 09:34:01 2021

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence K G K F L S N L S Q A T N A L T Q A V V A S P V H A A T G A K V L G A D D D L D F T L P G L M P I E W Q R F Y N S R D E R R D G L L G A G W

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
B
S G G G
S S S
S
S S
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence S L P Y E I S V Q I E P H P R L L Y I D E Q G R R I D M G S S P G E G L S V R R N E N G Q L L I E S S D G I Y R L F E P L P G D S S R L R L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G
T T
B T T T T T S S S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence S L L G D R N D N R L H L E Y D S S G R L W L L R D T F E Q A Q L E L S Y S T L W P G R I A Q V E R L Y P D Q Q R E V L V S Y D Y D A A G D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
T T T
T T S
S S S T T S
T T S
T T S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence L A Q V R D S E G Q V Q R R F A Y D A G H R M I E H Q L A T G L R C F Y Q W T Q F A D Q Q W R V T R H W T D E G D S Y Q Y D Y D L E A G I T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T S
S S S
T T S
S S S
T T T T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence Q V T D S L Q R L S R R R W N S Q L Q I V E Y T D N L N Q T W A F E W N D E R Q L L S A T D P L G G R Y A Y S Y D E T G N L I A E T D P L G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T S
T T
T T T
T T
T T S
T T

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . . 390 . . . . . . . . . 400 . . . . . . . . . 410 . . . . . . . . . 420

Sequence H S H S T L W L E H W S L P Q T L T D P A G E S W H L R Y D P R G N C I A E V D P L G Q V T Q Y R H D A H G Q V V E I I D A A G R S R K M R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S S
T T S
T T S
T T
T T S
G G G

. . . . . . . . . 430 . . . . . . . . . 440 . . . . . . . . . 450 . . . . . . . . . 460 . . . . . . . . . 470 . . . . . . . . . 480 . . . . . . . . . 490

Sequence W N S S G Q L L E H L D C S G Y P T R F E Y D R R G N V K A I I D A L G E H T R F H Y D C Q G R L L S S Q L A D G R A E H F Q R S S N G Q L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
S S S
T T S
S S
T T S
T T S
T T T

. . . . . . . . . 500 . . . . . . . . . 510 . . . . . . . . . 520 . . . . . . . . . 530 . . . . . . . . . 540 . . . . . . . . . 550 . . . . . . . . . 560

Sequence Q G Y T D P S G Y T T L Y Q Y N R R G Q I R Q R I D A H G R Q V R F D Y D A Y G R L L A L T N E N G E S Y R F A W D A G N R L S E Q Q D L D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
T T S
T T
T T S
S S S
T T S
S S

. . . . . . . . . 570 . . . . . . . . . 580 . . . . . . . . . 590 . . . . . . . . . 600 . . . . . . . . . 610 . . . . . . . . . 620 . . . . . . . . . 630

Sequence G S A K R Y G Y D L L N N V V E L Q S H P A P A P I I H R F E R D A V G R L L A K I T D D G R S Q Y T Y D P L N Q L T A A S F T D N L G N Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T S
S S S
T T
T T S
T T S

. . . . . . . . . 640 . . . . . . . . . 650 . . . . . . . . . 660 . . . . . . . . . 670 . . . . . . . . . 680 . . . . . . . . . 690 . . . . . . . . . 700

Sequence Q A L S F S Y D A L G Q L L E E H T V A G S L I H R Y D E L G N L T Q T Q L P D K R W L N R L Y Y G S G H L H Q I N L D G Q V V S D F Q R D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
S S
T T S
T T
S S S S S
T T T

. . . . . . . . . 710 . . . . . . . . . 720 . . . . . . . . . 730 . . . . . . . . . 740 . . . . . . . . . 750 . . . . . . . . . 760 . . . . . . . . . 770

Sequence R L H R E V L R T Q G Q I S T R S E Y D R C G R L R A R L Q H S E R H L E Y D D S D N L V G L A E R H A T G Q H R Q L F H Y D A T G R I I A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
S S
T T S
T T
S S S S
T T S

. . . . . . . . . 780 . . . . . . . . . 790 . . . . . . . . . 800 . . . . . . . . . 810 . . . . . . . . . 820 . . . . . . . . . 830 . . . . . . . . . 840

Sequence S Q D G L Q G Q K E T F A Y D A A A N L L D G P K A G A G L V V H N K L L T Y Q D K R Y R Y D A F G R M I E K R S G R R G V Q R F A Y D A E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S S
B
T T S
B
G G G G S S
G G G
T T
T T S
S S S
T T

. . . . . . . . . 850 . . . . . . . . . 860 . . . . . . . . . 870 . . . . . . . . . 880 . . . . . . . . . 890 . . . . . . . . . 900 . . . . . . . . . 910

Sequence H R L I E V R N Q T S S G E T L V R M R Y D V L G R R I S K S E Y D S Q G N L L G E T R F V W D G L R L L Q E Q R N Q Q T S L Y V Y E D L G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T
T T S
G G G
S S S S T T S T T S

. . . . . . . . . 920 . . . . . . . . . 930 . . . . . . . . . 940 . . . . . . . . . 950 . . . . . . . . . 960 . . . . . . . . . 970 . . . . . . . . . 980

Sequence H A P L A R V D G L G A Q Q K I R Y Y H N D L N G L P Q Q L C E P D G H S V W Q A R Y Q V W G N T V E E I R E P Y Y I E E Q N L R F Q G Q Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S G G G
T T S
T T
S S T T
S S
S
S T T

. . . . . . . . . 990 . . . . . . . . . 1000 . . . . . . . . . 1010 . . . . . . . . . 1020 . . . . . . . . . 1030 . . . . . . . . . 1040 . . . . . . .

Sequence L D R E T G L H F N T F R F Y D P D I G R F T T P D P I G L A G G L N L Y Q Y A P N P I G W I D P L G W N Y H V F E K L T K Q F E V A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T
B
T T T S
T T T T S S
S S
G G G
S
S S B
S
T T T
S S
B S
B

Download: PDB structure FASTA sequence
Hidden Markov model

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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	G	K	F	L	S	N	L	S	Q	A	T	N	A	L	T	Q	A	V	V	A	S	P	V	H	A	A	T	G	A	K	V	L	G	A	D	D	D	L	D	F	T	L	P	G	L	M	P	I	E	W	Q	R	F	Y	N	S	R	D	E	R	R	D	G	L	L	G	A	G	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																										S	S	S			B				S	G	G	G							S	S	S										S								S	S		S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	L	P	Y	E	I	S	V	Q	I	E	P	H	P	R	L	L	Y	I	D	E	Q	G	R	R	I	D	M	G	S	S	P	G	E	G	L	S	V	R	R	N	E	N	G	Q	L	L	I	E	S	S	D	G	I	Y	R	L	F	E	P	L	P	G	D	S	S	R	L	R	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G																T	T											B	T	T	T							T	T							S	S	S									T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	L	L	G	D	R	N	D	N	R	L	H	L	E	Y	D	S	S	G	R	L	W	L	L	R	D	T	F	E	Q	A	Q	L	E	L	S	Y	S	T	L	W	P	G	R	I	A	Q	V	E	R	L	Y	P	D	Q	Q	R	E	V	L	V	S	Y	D	Y	D	A	A	G	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S	S									T	T	T								T	T	S										S	S	S	T	T	S									T	T	S												T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	L	A	Q	V	R	D	S	E	G	Q	V	Q	R	R	F	A	Y	D	A	G	H	R	M	I	E	H	Q	L	A	T	G	L	R	C	F	Y	Q	W	T	Q	F	A	D	Q	Q	W	R	V	T	R	H	W	T	D	E	G	D	S	Y	Q	Y	D	Y	D	L	E	A	G	I	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T											T	T	S								S	S	S											T	T	S										S	S	S									T	T	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	Q	V	T	D	S	L	Q	R	L	S	R	R	R	W	N	S	Q	L	Q	I	V	E	Y	T	D	N	L	N	Q	T	W	A	F	E	W	N	D	E	R	Q	L	L	S	A	T	D	P	L	G	G	R	Y	A	Y	S	Y	D	E	T	G	N	L	I	A	E	T	D	P	L	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T										T	T	S								T	T										T	T	T								T	T										T	T	S								T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	H	S	H	S	T	L	W	L	E	H	W	S	L	P	Q	T	L	T	D	P	A	G	E	S	W	H	L	R	Y	D	P	R	G	N	C	I	A	E	V	D	P	L	G	Q	V	T	Q	Y	R	H	D	A	H	G	Q	V	V	E	I	I	D	A	A	G	R	S	R	K	M	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S	S	S								T	T	S									T	T	S								T	T										T	T	S								G	G	G
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	W	N	S	S	G	Q	L	L	E	H	L	D	C	S	G	Y	P	T	R	F	E	Y	D	R	R	G	N	V	K	A	I	I	D	A	L	G	E	H	T	R	F	H	Y	D	C	Q	G	R	L	L	S	S	Q	L	A	D	G	R	A	E	H	F	Q	R	S	S	N	G	Q	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S								S	S	S									T	T	S								S	S										T	T	S								T	T	S									T	T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	Q	G	Y	T	D	P	S	G	Y	T	T	L	Y	Q	Y	N	R	R	G	Q	I	R	Q	R	I	D	A	H	G	R	Q	V	R	F	D	Y	D	A	Y	G	R	L	L	A	L	T	N	E	N	G	E	S	Y	R	F	A	W	D	A	G	N	R	L	S	E	Q	Q	D	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	S									T	T	S								T	T										T	T	S								S	S	S									T	T	S								S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	G	S	A	K	R	Y	G	Y	D	L	L	N	N	V	V	E	L	Q	S	H	P	A	P	A	P	I	I	H	R	F	E	R	D	A	V	G	R	L	L	A	K	I	T	D	D	G	R	S	Q	Y	T	Y	D	P	L	N	Q	L	T	A	A	S	F	T	D	N	L	G	N	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S									T	T	S																						S	S	S								T	T									T	T	S										T	T	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	Q	A	L	S	F	S	Y	D	A	L	G	Q	L	L	E	E	H	T	V	A	G	S	L	I	H	R	Y	D	E	L	G	N	L	T	Q	T	Q	L	P	D	K	R	W	L	N	R	L	Y	Y	G	S	G	H	L	H	Q	I	N	L	D	G	Q	V	V	S	D	F	Q	R	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	S								S	S									T	T	S								T	T									S	S	S	S	S						T	T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	R	L	H	R	E	V	L	R	T	Q	G	Q	I	S	T	R	S	E	Y	D	R	C	G	R	L	R	A	R	L	Q	H	S	E	R	H	L	E	Y	D	D	S	D	N	L	V	G	L	A	E	R	H	A	T	G	Q	H	R	Q	L	F	H	Y	D	A	T	G	R	I	I	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S								S	S									T	T	S																	T	T										S	S	S	S										T	T	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	S	Q	D	G	L	Q	G	Q	K	E	T	F	A	Y	D	A	A	A	N	L	L	D	G	P	K	A	G	A	G	L	V	V	H	N	K	L	L	T	Y	Q	D	K	R	Y	R	Y	D	A	F	G	R	M	I	E	K	R	S	G	R	R	G	V	Q	R	F	A	Y	D	A	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	S	S							B		T	T	S		B			G	G	G	G	S	S				G	G	G						T	T							T	T	S								S	S	S									T	T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	H	R	L	I	E	V	R	N	Q	T	S	S	G	E	T	L	V	R	M	R	Y	D	V	L	G	R	R	I	S	K	S	E	Y	D	S	Q	G	N	L	L	G	E	T	R	F	V	W	D	G	L	R	L	L	Q	E	Q	R	N	Q	Q	T	S	L	Y	V	Y	E	D	L	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S										T	T											T	T	S										G	G	G											S	S	S	S							T	T								S	T	T	S
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
Sequence	H	A	P	L	A	R	V	D	G	L	G	A	Q	Q	K	I	R	Y	Y	H	N	D	L	N	G	L	P	Q	Q	L	C	E	P	D	G	H	S	V	W	Q	A	R	Y	Q	V	W	G	N	T	V	E	E	I	R	E	P	Y	Y	I	E	E	Q	N	L	R	F	Q	G	Q	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S								S	S	G	G	G										T	T	S								T	T											S	S	T	T								S	S			S						S	T	T
	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.
Sequence	L	D	R	E	T	G	L	H	F	N	T	F	R	F	Y	D	P	D	I	G	R	F	T	T	P	D	P	I	G	L	A	G	G	L	N	L	Y	Q	Y	A	P	N	P	I	G	W	I	D	P	L	G	W	N	Y	H	V	F	E	K	L	T	K	Q	F	E	V	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T	T		B		T	T	T	S				T	T	T	T			S	S			S	S		G	G	G		S		S	S	B			S		T	T	T				S	S					B	S										B