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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7q1cB_

Fold library idPDB HeaderMoleculeTitle
c7q1cB_2.30PDB header: hydrolaseChain: B: PDB Molecule: histone deacetylase dac2;


Added to library: Sat Dec 18 08:38:00 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LPPPVAIIVGHNIDASAMPLTYERNRFVIDMLQHYACPVFSHVSSDVFEWVLEPFPVVGVEDMTAFHDRA
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Known secondary structure (DSSP)


S

S
TTTT

GGGTTTTSGGGB


BSS
S





GGGTTTTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence YLNYLSIREALSEVDERASTVKPPLRVLPDLVPIPADEEYGLVNENMPFVGMWRTIQATVSGTLLAARLL
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Known secondary structure (DSSP) GGGSS
B
TTT
SS
TTS

S
BB


GGGTTTT
SGGG

BTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence AQPGRFAAIHWFGGRHHAKKSTAGGFCFANDVVLGVLELKKLLSSDKNGILVVDVDAHHGDGTQSAFLHD
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Known secondary structure (DSSP) STT

TT


TT

SS

BTTBSS
S
TTS

SSS

TTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence NSVLTLSMHAHGVGIFPGTGGIEEIGAGLGRGFTMNVPLPEGATDILAVTLMYRSIHFAFKKLGEGLAAI
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Known secondary structure (DSSP) SS
STT
TT



TT



GGGTTS
TTBBGGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence VIVCGSDALSGDPLGALNLTVGGMQSIIRLLLKEAARRSLKVLLLGAGGYVDTSCARLAGVVTKDVLSCA
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Known secondary structure (DSSP)

STTBTT
SS


BB
T




S
 .........360.........370.........380.........390.........400.........410.........420
Sequence AAMRLGKTEYFGDSANLGDNLGVAVPEGCEYFTRYGPSFLMHGLPPARVSKLYRLPYGSPLFMRMQRAAT
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Known secondary structure (DSSP) TTT
S


TTS

TTT
TT
B

TT
TTGGGGTTT
BTT




SS

B
S

TT
TT
 ......
Sequence KEALRR
Predicted secondary structure

SS confidence





Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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