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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7pw8A_

Fold library idPDB HeaderMoleculeTitle
c7pw8A_2.82PDB header: transferaseChain: A: PDB Molecule: smg1,serine/threonine-protein kinase smg1,smg1,


Added to library: Sat Dec 4 08:55:10 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP)


TTS

GGG

TTTTT



 .........80.........90.........100.........110.........120.........130.........140
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSTNFRDTVDILVGSLTQQ
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Known secondary structure (DSSP)


STTT

TT

TTTT

T
 .........150.........160.........170.........180.........190.........200.........210
Sequence VSGWLQSLEAFSTTLLGQFLEDMEAYAEDLSSVSLPKLAALLRVFSTVVRSIAYVTDVLYRVMRCVTAAN
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Known secondary structure (DSSP)

TT







 .........220.........230.........240.........250.........260.........270.........280
Sequence QVFFSEAVLTAANECVGVLLGSLDPSMTIHCDMVITYGLDQLENCQTCGTDYIISVLNLLTLIVEQINTK
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Known secondary structure (DSSP)
SS

S
S
S


TT
SS

S
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence LPSSFVEKLFIPSSKLLFLRYHKEKEVVAVAHAVYQAVLSLKNIPVLETAYKLILGEMTCALNNLLHSLQ
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Known secondary structure (DSSP)

SSTT
GGG
SSTT
S
TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence LPEACSEIKHEAFKNHVFNVDNAKFVVIFDLSALTTIGNAKNWALSPTVFALLSKNLMIVHSDLAVHFPA
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Known secondary structure (DSSP)




TTS

GGGSS



T





SS
TTGGGGTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence IQYAVLYTLYSHCTRHDHFISSSTVTTATKKHFSIILNLLGILLKKDNLNQDTRKLLMTWALEAAVLMRK
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Known secondary structure (DSSP) TTGGG
TT


TTTTTTT
SS

TTS
 .........500.........510.........520.........530.........540.........550.........560
Sequence SETYAPLFSLPSFHKFCKGLLANTLVEDVNICLQACSSLHALSSSLPDDLLQRCVDVCRVQLVHSGTRIR
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Known secondary structure (DSSP)
GGGGGGGGSTSS
S
T
TT

TSBSS
 .........570.........580.........590.........600.........610.........620.........630
Sequence QAFGKLLKSIPLDVVLSNNNHTEIQEISLALRSHMSKAPSNTFHPQDFSDVISFILYGNSHRTNWLERLF
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Known secondary structure (DSSP) TTS
TS



S






TS





 .........640.........650.........660.........670.........680.........690.........700
Sequence YSCQRLDKTIPRNLLKTDAVLWQWAIWEAAQFTVLSKLRTPLGRAQDTFQTIEGIIRSLAAHTLNPDQDV
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Known secondary structure (DSSP) T

S




GGGTTBTTT

TT
S
TTS

 .........710.........720.........730.........740.........750.........760.........770
Sequence SQWTTADNDEGHGNNQLRLVLLLQYLENLEKLMYNAYEGCANALTSPPKVIRTFFYTNRQTCQDWLTRIR
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Known secondary structure (DSSP) TTTS

SST

SSSS



T
 .........780.........790.........800.........810.........820.........830.........840
Sequence LSIMRVGLLAGQPAVTVRHGFDLLTEMKTNELEVTIMMVVEALCELHCPEAIQGIAVWSSSINLLWINSV
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Known secondary structure (DSSP) TT




TT
TT


TT
 .........850.........860.........870.........880.........890.........900.........910
Sequence AQQAEGRFEKASVEYQEHLCAMTGVDCCISSFDKSVLTLANSSPEVINYLGNKACECYISIADWAAVQEW
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Known secondary structure (DSSP) TT
SS





S



TT
 .........920.........930.........940.........950.........960.........970.........980
Sequence QNSIHDLKKSTSSTSLNLKADFNYIKSLSSFESGKFVECTEQLELLPGENINLDMKKLLPNMLSPDPREL
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Known secondary structure (DSSP) TTT
SS



S
T
TSSSSS





S

S
SS

S
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence QKSIEVQLLRSSVCLATALNWQSITENVVKYLKQTSRIAIGPLRLSTLTVSQSLPVLSTLQLYCSSALEN
Predicted secondary structure
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Known secondary structure (DSSP)


SSSTTT
SS

 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence TVSNRLSTEDCLIPLFSEALRSCKQHDVRPWMQALRYTMYQNQLLEKIKEQTVPIRSHLMELGLTAAKFA
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Known secondary structure (DSSP) SS
SGGGS



GGGGTT
TTS
SGGG

S




 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence RKRGNVSLATRLLAQCSETTAQDLVQHFKKWGPELDIEKTKLLYTAGQSTHAMEMLSSCAISFCKSVKAE
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Known secondary structure (DSSP) TTT






T
TTSSS
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence YAVAKSILTLAKWIQAEWKEISGQLKQVYRAQHQLSTLSKNILTLIELPSIESESTVHIGVGEPDFILGQ
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Known secondary structure (DSSP) T



T





SSTTSSS

 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence LYHLSSVQAPEVAKSWAALASWAYRWGRKVVDNASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP)
TT
T

T

TS


 .........1340.........1350.........1360.........1370.........1380.........1390.........1400
Sequence XXXXXXXEGVIKVWRKVVDRIFSLYKLSCSAYFTFLKLNAQSTDDMIVMATLRLLRLLVKHAGELRQYLE
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Known secondary structure (DSSP) T


TTT



S
SSS
 .........1410.........1420.........1430.........1440.........1450.........1460.........1470
Sequence HGLETTPTAPWRGIIPQLFSRLNHPEVYVRQSICNLLCRVAQDSPHLILYPAIVGTIQAMMQDCYSKIVD
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Known secondary structure (DSSP) S
SSTTTTSGGG
S
STT
GGGT

T
 .........1480.........1490.........1500.........1510.........1520.........1530.........1540
Sequence KLSSANPTMVLQVQMLVAELRRVTWDELWLGVLLQQHMYVLXXXXXXXXXXXXXXXXPHEKWFQDNYGDA
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Known secondary structure (DSSP) TS
T



T

TT
 .........1550.........1560.........1570.........1580.........1590.........1600.........1610
Sequence IENALEKLKXXXXXXXXXXXXXXXXYILRLEEIAAMTNTEIALPGEVSARDTVTIHSVGGTITILPTKTK
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Known secondary structure (DSSP) T




STT




S


B
S

SS
SS

B
S
SSSSS
 .........1620.........1630.........1640.........1650.........1660.........1670.........1680
Sequence PKKLLFLGSDGKSYPYLFKGLEDLHLDERIMQFLSIVNTMFATINRQETPRFHARHYSVTPLGTRSGLIQ
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Known secondary structure (DSSP)
TTS
SS

TTTTTGGGS
SS








SSS
 .........1690.........1700.........1710.........1720.........1730.........1740.........1750
Sequence WVDGATPLFGLYKRWQQREAALQAQKIVPRPSELYYSKIGPALKTVGLSLDVSRRDWPLHVMKAVLEELM
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Known secondary structure (DSSP)


S
T




TTT

TTS
SSS

 .........1760.........1770.........1780.........1790.........1800.........1810.........1820
Sequence EATPPNLLAKELWSSCTTPDEWWRVTQSYARSTAVMSMVGYIIGLGDRHLDNVLIDMTTGEVVHIDYNVC
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Known secondary structure (DSSP) S
TT
SST




TTS
TTT




TTT
 .........1830.........1840.........1850.........1860.........1870.........1880.........1890
Sequence FEKGKSLRVPEKVPFRMTQNIETALGVTGVEGVFRLSCEQVLHIMRRGRETLLTLLEAFVYDPLVDWTSY
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Known secondary structure (DSSP) TTGGGSSSS



SS


TT
SSTTSSSS
TT




 .........1900.........1910.........1920.........1930.........1940...
Sequence AVSVWKRVKAKLEGRDVDPNRRMSVAEQVDYVIKEATNLDNLAQLYEGWTAWV
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Known secondary structure (DSSP) TT
SS
SS




SS
GGG
TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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