Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7pw7A_

Fold library idPDB HeaderMoleculeTitle
c7pw7A_3.59PDB header: transferaseChain: A: PDB Molecule: smg1,serine/threonine-protein kinase smg1,smg1,


Added to library: Sat Dec 4 09:13:56 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Predicted secondary structure






SS confidence





































































Known secondary structure (DSSP)


TTTTGGGT

TT


TTTTT



 .........80.........90.........100.........110.........120.........130.........140
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSTNFRDTVDILVGSLTQQ
Predicted secondary structure










SS confidence





































































Known secondary structure (DSSP)


SS

T

TTT


 .........150.........160.........170.........180.........190.........200.........210
Sequence VSGWLQSLEAFSTTLLGQFLEDMEAYAEDLSSVSLPKLAALLRVFSTVVRSIAYVTDVLYRVMRCVTAAN
Predicted secondary structure








SS confidence





































































Known secondary structure (DSSP)





T



 .........220.........230.........240.........250.........260.........270.........280
Sequence QVFFSEAVLTAANECVGVLLGSLDPSMTIHCDMVITYGLDQLENCQTCGTDYIISVLNLLTLIVEQINTK
Predicted secondary structure













SS confidence





































































Known secondary structure (DSSP)
SS

S
S
S



TT
SS

S
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence LPSSFVEKLFIPSSKLLFLRYHKEKEVVAVAHAVYQAVLSLKNIPVLETAYKLILGEMTCALNNLLHSLQ
Predicted secondary structure












SS confidence





































































Known secondary structure (DSSP)

TTSSTTSSGGGTTTSSST
S
TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence LPEACSEIKHEAFKNHVFNVDNAKFVVIFDLSALTTIGNAKNWALSPTVFALLSKNLMIVHSDLAVHFPA
Predicted secondary structure




SS confidence





































































Known secondary structure (DSSP)




GGG

GGGSS



TT





SS
TTT
GGGTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence IQYAVLYTLYSHCTRHDHFISSSTVTTATKKHFSIILNLLGILLKKDNLNQDTRKLLMTWALEAAVLMRK
Predicted secondary structure






SS confidence





































































Known secondary structure (DSSP) TTGGG
S


TTTS
S


TS
 .........500.........510.........520.........530.........540.........550.........560
Sequence SETYAPLFSLPSFHKFCKGLLANTLVEDVNICLQACSSLHALSSSLPDDLLQRCVDVCRVQLVHSGTRIR
Predicted secondary structure











SS confidence





































































Known secondary structure (DSSP)
GGGGGGGSSSSSS
T
TT

SSBSSS
 .........570.........580.........590.........600.........610.........620.........630
Sequence QAFGKLLKSIPLDVVLSNNNHTEIQEISLALRSHMSKAPSNTFHPQDFSDVISFILYGNSHRTNWLERLF
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP) TS
T




S






TS





 .........640.........650.........660.........670.........680.........690.........700
Sequence YSCQRLDKTIPRNLLKTDAVLWQWAIWEAAQFTVLSKLRTPLGRAQDTFQTIEGIIRSLAAHTLNPDQDV
Predicted secondary structure



SS confidence





































































Known secondary structure (DSSP) T

S




GGGTTBTTT

TTSS
TTS

 .........710.........720.........730.........740.........750.........760.........770
Sequence SQWTTADNDEGHGNNQLRLVLLLQYLENLEKLMYNAYEGCANALTSPPKVIRTFFYTNRQTCQDWLTRIR
Predicted secondary structure








SS confidence





































































Known secondary structure (DSSP) TTTS

SST

SSSS



T
 .........780.........790.........800.........810.........820.........830.........840
Sequence LSIMRVGLLAGQPAVTVRHGFDLLTEMKTNELEVTIMMVVEALCELHCPEAIQGIAVWSSSINLLWINSV
Predicted secondary structure














SS confidence





































































Known secondary structure (DSSP) TT





ST
TT


TT
 .........850.........860.........870.........880.........890.........900.........910
Sequence AQQAEGRFEKASVEYQEHLCAMTGVDCCISSFDKSVLTLANSSPEVINYLGNKACECYISIADWAAVQEW
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP) T
SS





S



TT
 .........920.........930.........940.........950.........960.........970.........980
Sequence QNSIHDLKKSTSSTSLNLKADFNYIKSLSSFESGKFVECTEQLELLPGENINLDMKKLLPNMLSPDPREL
Predicted secondary structure

















SS confidence





































































Known secondary structure (DSSP)

SS



S
T
TSSSS





S

S
SS

S
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence QKSIEVQLLRSSVCLATALNWQSITENVVKYLKQTSRIAIGPLRLSTLTVSQSLPVLSTLQLYCSSALEN
Predicted secondary structure
SS confidence





































































Known secondary structure (DSSP)


TTTTTS

SS

 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence TVSNRLSTEDCLIPLFSEALRSCKQHDVRPWMQALRYTMYQNQLLEKIKEQTVPIRSHLMELGLTAAKFA
Predicted secondary structure










SS confidence





































































Known secondary structure (DSSP) SS
SGGGS



GGGGTT
TTS
SGGG

S




 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence RKRGNVSLATRLLAQCSETTAQDLVQHFKKWGPELDIEKTKLLYTAGQSTHAMEMLSSCAISFCKSVKAE
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP) TTT






TT
TSS

S
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence YAVAKSILTLAKWIQAEWKEISGQLKQVYRAQHQLSTLSKNILTLIELPSIESESTVHIGVGEPDFILGQ
Predicted secondary structure













SS confidence





































































Known secondary structure (DSSP) TTT



T





TTGGGSSS
ST
 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence LYHLSSVQAPEVAKSWAALASWAYRWGRKVVDNASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Predicted secondary structure







SS confidence





































































Known secondary structure (DSSP)
TT
T

T

TS


 .........1340.........1350.........1360.........1370.........1380.........1390.........1400
Sequence XXXXXXXEGVIKVWRKVVDRIFSLYKLSCSAYFTFLKLNAQSTDDMIVMATLRLLRLLVKHAGELRQYLE
Predicted secondary structure












SS confidence





































































Known secondary structure (DSSP)

TT

TT



SSTTS
 .........1410.........1420.........1430.........1440.........1450.........1460.........1470
Sequence HGLETTPTAPWRGIIPQLFSRLNHPEVYVRQSICNLLCRVAQDSPHLILYPAIVGTIQAMMQDCYSKIVD
Predicted secondary structure










SS confidence





































































Known secondary structure (DSSP) TTT

SSTTSS
T


S
STT
TTSS


 .........1480.........1490.........1500.........1510.........1520.........1530.........1540
Sequence KLSSANPTMVLQVQMLVAELRRVTWDELWLGVLLQQHMYVLXXXXXXXXXXXXXXXXPHEKWFQDNYGDA
Predicted secondary structure







SS confidence





































































Known secondary structure (DSSP) TTT
T



T

STT
 .........1550.........1560.........1570.........1580.........1590.........1600.........1610
Sequence IENALEKLKXXXXXXXXXXXXXXXXYILRLEEIAAMTNTEIALPGEVSARDTVTIHSVGGTITILPTKTK
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP)




STT




S


B
S

SS
SS

B
S
SSSS
 .........1620.........1630.........1640.........1650.........1660.........1670.........1680
Sequence PKKLLFLGSDGKSYPYLFKGLEDLHLDERIMQFLSIVNTMFATINRQETPRFHARHYSVTPLGTRSGLIQ
Predicted secondary structure

















SS confidence





































































Known secondary structure (DSSP)
TTS

SS

TTTTGGGS
SS







SSSS
 .........1690.........1700.........1710.........1720.........1730.........1740.........1750
Sequence WVDGATPLFGLYKRWQQREAALQAQKIVPRPSELYYSKIGPALKTVGLSLDVSRRDWPLHVMKAVLEELM
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP)


S





T

TTS
SSS

 .........1760.........1770.........1780.........1790.........1800.........1810.........1820
Sequence EATPPNLLAKELWSSCTTPDEWWRVTQSYARSTAVMSMVGYIIGLGDRHLDNVLIDMTTGEVVHIDYNVC
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP) TTS
T
SST




GGG
TTT





S
 .........1830.........1840.........1850.........1860.........1870.........1880.........1890
Sequence FEKGKSLRVPEKVPFRMTQNIETALGVTGVEGVFRLSCEQVLHIMRRGRETLLTLLEAFVYDPLVDWTAS
Predicted secondary structure
































SS confidence





































































Known secondary structure (DSSP) SS
GGGSSS



SS


TT
SS
SSSTS
TT





 .........1900.........1910.........1920.........1930.........1940....
Sequence YAVSVWKRVKAKLEGRDVDPNRRMSVAEQVDYVIKEATNLDNLAQLYEGWTAWV
Predicted secondary structure























SS confidence





















































Known secondary structure (DSSP) T
SS
SS




SSS
GGG
TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D