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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7pv8A_

Fold library idPDB HeaderMoleculeTitle
c7pv8A_2.05PDB header: cell invasionChain: A: PDB Molecule: internalin b;


Added to library: Sat Jan 29 09:42:53 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ETITVPTPIKQIFSDDAFAETIKDNLKKKSVTDAVTQNELNSIDQIIANNSDIKSVQGIQYLPNVTKLFL
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Known secondary structure (DSSP)



S


ST
S
TTS
T



SS




TTGGG
TT


 .........80.........90.........100.........110.........120.........130.........140
Sequence NGNKLTDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGNNK
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Known secondary structure (DSSP) TTS




GGGTT
TT


TTS



GGGGTT
TT


TTS




GGGGG
TT



SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence ITDITVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISDLRALAGLKNLDVLELFSQECLNK
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Known secondary structure (DSSP)



GGGGG
TT
S

SS




GGGTT
TT



SS


B
GGGTT
TT
S




 .........220.........230.........240.........250.........260.........270.........280
Sequence PINHQSNLVVPNTVKNTDGSLVTPEIISDDGDYEKPNVKWHLPEFTNEVSFIFYQPVTIGKAKARFHGRV
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Known secondary structure (DSSP)


S


B
TTS
B

STT
TT
SS

STT
 .........290.........300.........310.........320.........330.........340.........350
Sequence TQPLKEVYTVSYDVDGEVIKTKVEAGTRITAPKPPTKQGYVFKGWYTEKNGGHEWNFNTDYMSGNDFTLY
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Known secondary structure (DSSP)
TTTTSB








TTSSSSSS
B

TTT
B

SS
 .......
Sequence AVFKAET
Predicted secondary structure


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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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