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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7ptxA_

Fold library idPDB HeaderMoleculeTitle
c7ptxA_4.03PDB header: toxinChain: A: PDB Molecule: alpha-latrocrustotoxin-lt1a;


Added to library: Sat Dec 11 10:17:13 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TLGDVAGDVSSIEGADLVATPIAAGGHLAKGATDAAMIAMDCSSIPFDEIKQQLNQRFNEVDKKLQKGAE
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Known secondary structure (DSSP)
SSGGGTTTTTS


STSTTTTTS

S
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence ALENVTELAEKTYSSVEKMRVEMREGFNHVIATIENANTKQIITGINQIIQYFNDERENINNRQKEDYVA
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Known secondary structure (DSSP) TTGGGG
SSSTTTTTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence KLQEPASGNFLLYLRKSRTSEDGSLHSLLFKIINQELANNAIRALFALFYGTQTFISIMFYLVKQYSYLA
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Known secondary structure (DSSP) S
TTTSSS
TT


 .........220.........230.........240.........250.........260.........270.........280
Sequence DYHYQNGNLAEFNSNFDHMKTVFQDFKFTLIGINTSNSKPLVNTVLSIIEDVKNKRFIRNLRSNLYQKII
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Known secondary structure (DSSP) TTT



TTS







 .........290.........300.........310.........320.........330.........340.........350
Sequence KSTKSLLDLREKITSSVLINFREKSSSVPRIETPILKWTPGTVVKYAIQYEQDGKYSKISKWSNPITVQR
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Known secondary structure (DSSP)










S




SSS
TT



SS





SS



SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence LANPYITIDKDRRNRLVFRQFGNEKPELISILDSSQNEFRDIHRDLYNAAQMPYKETALGICRKLIDSGA
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Known secondary structure (DSSP)
S



SS

SS





SS


S
S
TT
 .........430.........440.........450.........460.........470.........480.........490
Sequence QVGASFEMGRKSIHASATAGNDDVARLLLAKNNGLLNVPDKNGYTPLHIASERKNNDFVKFLLEKGADVN
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Known secondary structure (DSSP)



BSSSSB
T
STTS


SS


TTS

TT


SS
 .........500.........510.........520.........530.........540.........550.........560
Sequence VRTFANELTPLHLAARQDFTIIVKTLMEKRGIDVNAKERAGFTPLHLSITSNSRAARTLINETPAGINIK
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Known secondary structure (DSSP)


SSS


TTTT
TTS


SS


TTS

TTGGGGGG
SSS


TT

 .........570.........580.........590.........600.........610.........620.........630
Sequence SNSGLTPLHLAVLQNNLSAAKVLVKSNKKVKLNEMDNNGMTPLHYASMLGNLEFVKYFTSEQGIDVNAKT
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Known secondary structure (DSSP)
TT


TT

SS

S



SSS

T
TT
SS
S


 .........640.........650.........660.........670.........680.........690.........700
Sequence KVKNWTPLHLAILFKKFDVAQSLLQVRNIDISTRADQAITPLHLAAATGNSQIVKTILNSGAVVDQETAN
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Known secondary structure (DSSP) SSS


TT

S


SS

B
T
TT

SS


TT
 .........710.........720.........730.........740.........750.........760.........770
Sequence GFTALHLAIMNPNTETPQFLIAKGANINAKTNDGSTPLHFAAALGKTNIFQLLMDKGANIKAENLINQMP
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Known secondary structure (DSSP) S

SS
STT

SS


TT


T
TT

TT


TT


 .........780.........790.........800.........810.........820.........830.........840
Sequence IHEAVVNGHLAIVKMLIEQDSSLMNAKNMRDEYPFYLAAEKRYKDVFNYLESKGADVNEKNNDGNTLLHL
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Known secondary structure (DSSP) T
GGGG



SSS

TT
S



GGG
TTSS
 .........850.........860.........870.........880.........890.........900.........910
Sequence FSINGEVEVVQFLIQNGADFRLRNKERKSFFDLAVEFGHAGIVGYAIEENKVDLQEPYRGKTILYHAICD
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Known secondary structure (DSSP) GGGT

STTT






TT


TT
TTS

TTS
BTTB
 .........920.........930.........940.........950.........960.........970.........980
Sequence SVKYDRIEVVRYFVETLNEDQCSPLQEAAAYAHLDLVKYFVQERGINPTAFNNDNQVSPLCIAIVGAPCG
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Known secondary structure (DSSP) S

S


TT

TT



S

S

SSSSS
TTSS
 .........990.........1000
Sequence FVKSCDTPERLDVVEYLVDK
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Known secondary structure (DSSP) S
TTTTST


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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