PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c7pq5L_

Fold library id	PDB Header	Molecule	Title
c7pq5L_	3.17	PDB header: toxin	Chain: L: PDB Molecule: tre23;

Links to external resources
Added to library: Sat Dec 4 09:00:55 2021

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence E G A K R Y R E A T K K F F T G I D V T T G Q L F D Q R T D I T L G Q T L P L V F L R S W V P E E Q G L L G P G W T D S F S E C A L A T G D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
B
B T T T T B
S S S
T T G G G
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R V E I R T T E G A S L Y F A L P A A Y T H S V N P D H P D F T L S R G E Q G Y I L R H R D S P V S K Y F T L P H P S P R R W L L T E H R D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S S
T T
S
T T S T T
S S S T T
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence V Y D N R L R F I Y N K H C Q L T Q V L H S D G P E L T L L Y N L R G Q L T E I R R T D E R L Q E V M A R Y H Y H D N G R L A E A D S T Q N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T S
T T S
T T
S T T
T T S
S S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence F H L Y Y E Y N A Q G L I S R W S D G D Q T W V D Y R Y D K Q G R C T D S V G A G G F Y P V H L D Y A P G I T R S T T P Q G H T T T G H Y N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
S S S
T T S
G G G
S
T T
T T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence D Q Q L I T E I H T P C G G V T R Y E Y D R W G N L V R Q I L P E G E T L T L T Y L A D T G R V T S L T E A T G A V W Q Y S Y E A D S L Q L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
T T
T T S
T T
T T T T
T T S
S S S

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . . 390 . . . . . . . . . 400 . . . . . . . . . 410 . . . . . . . . . 420

Sequence T G M T D P L Q R T W L P Q Y D E Q G Q P A G F I A P D G R K T T L T R N A F G L V T S E T D P D G N S R T Q E Y D K H Q R L V R V L D E E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
G G G
T T S
T T S
T T S
T T
T T

. . . . . . . . . 430 . . . . . . . . . 440 . . . . . . . . . 450 . . . . . . . . . 460 . . . . . . . . . 470 . . . . . . . . . 480 . . . . . . . . . 490

Sequence N R T V S L G Y D S Q D R L R S L T A A G A L W R W R Y D R H H R V A V S D R P D N Q L E H F T H D R H G N L T C W T D A R G V K W Q V E Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T
S S S
T T S
T T S
T T
T T

. . . . . . . . . 500 . . . . . . . . . 510 . . . . . . . . . 520 . . . . . . . . . 530 . . . . . . . . . 540 . . . . . . . . . 550 . . . . . . . . . 560

Sequence G P F D L P V A R R D G E G H R W Q Y R Y D A D T L Q L T Q V I N P Q G E T Y S Y T L D A D G R V I T E Q D Y A G T Q W H Y R Y D R S G N C

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
T T
T T T
T T S
T T S
T T
T T S

. . . . . . . . . 570 . . . . . . . . . 580 . . . . . . . . . 590 . . . . . . . . . 600 . . . . . . . . . 610 . . . . . . . . . 620 . . . . . . . . . 630

Sequence I E K R D G E E N V T R Y D Y D A A R R L T T L H T P E G P T R Y H Y D S V G R L L T V D S P D S T L H F E Y D G Q D R I V R E I Q P H G E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T S
T T
S S S
T T T T T T T

. . . . . . . . . 640 . . . . . . . . . 650 . . . . . . . . . 660 . . . . . . . . . 670 . . . . . . . . . 680 . . . . . . . . . 690 . . . . . . . . . 700

Sequence I Q R H Y P D N R T A E R Q L L T G H P G R W Q S R R E V N R V G E L I T L T L A G Q A P L T I E R D D A G R D T G R Y V D G G F I L R Q Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B T T
S S S
T T S
T T S
T T S

. . . . . . . . . 710 . . . . . . . . . 720 . . . . . . . . . 730 . . . . . . . . . 740 . . . . . . . . . 750 . . . . . . . . . 760 . . . . . . . . . 770

Sequence Y S L M G Q L T A Q R A G R N P A G V A R R Y E Y D T A L N L T A A S D D G Q Q V N Y L L N G N G Q V I S V G E G R T L R E H Y Q Y D E T G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T
T T
T T S
S S S
T T

. . . . . . . . . 780 . . . . . . . . . 790 . . . . . . . . . 800 . . . . . . . . . 810 . . . . . . . . . 820 . . . . . . . . . 830 . . . . . . . . . 840

Sequence Y P S R R F D G V Q E I M G E T L Y Q E G H R L N W V G S H R F V Y D R A G R M Q E K Q F L A E G C R L A L T K Y R W N S Q N Q L T G L I T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S S S S
S T T S T T T
T T
T T S
S S S
S S S

. . . . . . . . . 850 . . . . . . . . . 860 . . . . . . . . . 870 . . . . . . . . . 880 . . . . . . . . . 890 . . . . . . . . . 900 . . . . . . . . . 910

Sequence P D G I P W E Y R Y D A F G R R T E K R C I Q S G K L T T Y L W D G N V P A E I R E Y Q H G R L K M I R H L V F D G W E L V A Q Q T Q A F T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T S
T T T T S S S S T T S S S S

. . . . . . . . . 920 . . . . . . . . . 930 . . . . . . . . . 940 . . . . . . . . . 950 . . . . . . . . . 960 . . . . . . . . . 970 . . . . . . . . . 980

Sequence L N L D N R V E L M A G E V Q T Q Y A V S A P T G E P L A L F D P A G K R V W R R P K Q S L Y G L R L G G Y G E N P Q L D P G L R F A G Q L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S S S S
T T S
T T S
B
T T S
B
S
S
G G G
B
S T T

. . . . . . . . . 990 . . . . . . . . . 1000 . . . . . . . . . 1010 . . . . . . . . . 1020 . . . . . . . . . 1030 . . . . . . . . . 1040 . . . . . . .

Sequence F D E E S G L F Y N R F R Y Y L P E A T C Y L S P D P T G L W G G E N T Y R Y V Q N P T K F I N P L G L A G E N V F I H A T N K A G F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T
S S
G G G T S S
S S
T T T
S
S S B
S
T T T
S S S S
S S T T
S
T T

Download: PDB structure FASTA sequence
Hidden Markov model

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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	G	A	K	R	Y	R	E	A	T	K	K	F	F	T	G	I	D	V	T	T	G	Q	L	F	D	Q	R	T	D	I	T	L	G	Q	T	L	P	L	V	F	L	R	S	W	V	P	E	E	Q	G	L	L	G	P	G	W	T	D	S	F	S	E	C	A	L	A	T	G	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S	S			B				B	T	T	T	T	B												S	S	S															T	T							G	G	G							S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	V	E	I	R	T	T	E	G	A	S	L	Y	F	A	L	P	A	A	Y	T	H	S	V	N	P	D	H	P	D	F	T	L	S	R	G	E	Q	G	Y	I	L	R	H	R	D	S	P	V	S	K	Y	F	T	L	P	H	P	S	P	R	R	W	L	L	T	E	H	R	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S	S	S								T	T		S					T	T	S	T	T							S	S	S						T	T		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	Y	D	N	R	L	R	F	I	Y	N	K	H	C	Q	L	T	Q	V	L	H	S	D	G	P	E	L	T	L	L	Y	N	L	R	G	Q	L	T	E	I	R	R	T	D	E	R	L	Q	E	V	M	A	R	Y	H	Y	H	D	N	G	R	L	A	E	A	D	S	T	Q	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T										T	T	S								T	T	S									T	T										S	T	T												T	T	S								S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	F	H	L	Y	Y	E	Y	N	A	Q	G	L	I	S	R	W	S	D	G	D	Q	T	W	V	D	Y	R	Y	D	K	Q	G	R	C	T	D	S	V	G	A	G	G	F	Y	P	V	H	L	D	Y	A	P	G	I	T	R	S	T	T	P	Q	G	H	T	T	T	G	H	Y	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	S								S	S	S									T	T	S								G	G	G		S								T	T							T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	D	Q	Q	L	I	T	E	I	H	T	P	C	G	G	V	T	R	Y	E	Y	D	R	W	G	N	L	V	R	Q	I	L	P	E	G	E	T	L	T	L	T	Y	L	A	D	T	G	R	V	T	S	L	T	E	A	T	G	A	V	W	Q	Y	S	Y	E	A	D	S	L	Q	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S								T	T										T	T	S								T	T										T	T	T	T								T	T	S									S	S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	T	G	M	T	D	P	L	Q	R	T	W	L	P	Q	Y	D	E	Q	G	Q	P	A	G	F	I	A	P	D	G	R	K	T	T	L	T	R	N	A	F	G	L	V	T	S	E	T	D	P	D	G	N	S	R	T	Q	E	Y	D	K	H	Q	R	L	V	R	V	L	D	E	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	S									G	G	G								T	T	S									T	T	S								T	T	S									T	T									T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	N	R	T	V	S	L	G	Y	D	S	Q	D	R	L	R	S	L	T	A	A	G	A	L	W	R	W	R	Y	D	R	H	H	R	V	A	V	S	D	R	P	D	N	Q	L	E	H	F	T	H	D	R	H	G	N	L	T	C	W	T	D	A	R	G	V	K	W	Q	V	E	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S									T	T								S	S	S									T	T	S								T	T	S									T	T									T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	G	P	F	D	L	P	V	A	R	R	D	G	E	G	H	R	W	Q	Y	R	Y	D	A	D	T	L	Q	L	T	Q	V	I	N	P	Q	G	E	T	Y	S	Y	T	L	D	A	D	G	R	V	I	T	E	Q	D	Y	A	G	T	Q	W	H	Y	R	Y	D	R	S	G	N	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S								T	T										T	T	T									T	T	S									T	T	S								T	T										T	T	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	I	E	K	R	D	G	E	E	N	V	T	R	Y	D	Y	D	A	A	R	R	L	T	T	L	H	T	P	E	G	P	T	R	Y	H	Y	D	S	V	G	R	L	L	T	V	D	S	P	D	S	T	L	H	F	E	Y	D	G	Q	D	R	I	V	R	E	I	Q	P	H	G	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S										T	T	S								T	T									S	S	S								T	T									T	T	T								T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	I	Q	R	H	Y	P	D	N	R	T	A	E	R	Q	L	L	T	G	H	P	G	R	W	Q	S	R	R	E	V	N	R	V	G	E	L	I	T	L	T	L	A	G	Q	A	P	L	T	I	E	R	D	D	A	G	R	D	T	G	R	Y	V	D	G	G	F	I	L	R	Q	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							B	T	T																						S	S	S								T	T	S									T	T	S								T	T	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	Y	S	L	M	G	Q	L	T	A	Q	R	A	G	R	N	P	A	G	V	A	R	R	Y	E	Y	D	T	A	L	N	L	T	A	A	S	D	D	G	Q	Q	V	N	Y	L	L	N	G	N	G	Q	V	I	S	V	G	E	G	R	T	L	R	E	H	Y	Q	Y	D	E	T	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T																							T	T									T	T									T	T	S								S	S	S									T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	Y	P	S	R	R	F	D	G	V	Q	E	I	M	G	E	T	L	Y	Q	E	G	H	R	L	N	W	V	G	S	H	R	F	V	Y	D	R	A	G	R	M	Q	E	K	Q	F	L	A	E	G	C	R	L	A	L	T	K	Y	R	W	N	S	Q	N	Q	L	T	G	L	I	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S		S	S			S	S	S				S	T	T	S			T	T	T						T	T							T	T	S										S	S	S											S	S	S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	P	D	G	I	P	W	E	Y	R	Y	D	A	F	G	R	R	T	E	K	R	C	I	Q	S	G	K	L	T	T	Y	L	W	D	G	N	V	P	A	E	I	R	E	Y	Q	H	G	R	L	K	M	I	R	H	L	V	F	D	G	W	E	L	V	A	Q	Q	T	Q	A	F	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S									T	T	S								T	T	T	T								S	S	S	S									T	T											S	S	S	S
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
Sequence	L	N	L	D	N	R	V	E	L	M	A	G	E	V	Q	T	Q	Y	A	V	S	A	P	T	G	E	P	L	A	L	F	D	P	A	G	K	R	V	W	R	R	P	K	Q	S	L	Y	G	L	R	L	G	G	Y	G	E	N	P	Q	L	D	P	G	L	R	F	A	G	Q	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	S	S	S	S																T	T	S								T	T	S									B		T	T	S		B		S				S		G	G	G				B		S	T	T
	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.
Sequence	F	D	E	E	S	G	L	F	Y	N	R	F	R	Y	Y	L	P	E	A	T	C	Y	L	S	P	D	P	T	G	L	W	G	G	E	N	T	Y	R	Y	V	Q	N	P	T	K	F	I	N	P	L	G	L	A	G	E	N	V	F	I	H	A	T	N	K	A	G	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T	T					S	S					G	G	G	T			S	S			S	S		T	T	T		S		S	S	B			S		T	T	T				S	S	S	S					S	S	T	T		S		T	T