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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7ppjA_

Fold library idPDB HeaderMoleculeTitle
c7ppjA_3.44PDB header: dna binding proteinChain: A: PDB Molecule: schlafen family member 5;


Added to library: Sat Jan 29 08:46:57 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LRIDVDTNFPECVVDAGKVTLGTQQRQEMDPRLREKQNEIILRAVCALLNSGGGIIKAEIENKGYNYERH
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Known secondary structure (DSSP)


B

SSSSS







TS
T


STT

TTTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence GVGLDVPPIFRSHLDKMQKENHFLIFVKSWNTEAGVPLATLCSNLYHRERTSTDVMDSQEALAFLKCRTQ
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Known secondary structure (DSSP)






GGGGSSTT


TTTTS
SS

S




SS



 .........150.........160.........170.........180.........190.........200.........210
Sequence NVSAAALFDRKRLQYLEKLNLPESTHVEFVMFSTDVSHCVKDRLPKCVSAFANTEGGYVFFGVHDETCQV
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Known secondary structure (DSSP)




BTT
B
S


BTTB



SSSS

TB
SSS
BB
 .........220.........230.........240.........250.........260.........270.........280
Sequence IGCEKEKIDLTSLRASIDGCIKKLPVHHFCTQRPEIKYVLNFLEVHDKGALRGYVCAIKVEKFCCAVFAK
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Known secondary structure (DSSP)



TTT

SS
B

SSSS




TT


SS
B
SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence VPSSWQVKDNRVRQLPTREWTAWMMEADPDLSRCPEMVLQLSLSSATPRSKPVCIHKNSECLKEQQKRYF
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Known secondary structure (DSSP) S
S
TT

T




TTSSTTSS
TTSS
TT


BSSS

S
 .........360.........370.........380.........390.........400.........410.........420
Sequence PVFSDRVVYTPESLYKELFSQHKGLRDLINTEMRPFSQGILIFSQSWAVDLGLQEKQGVICDALLISQNN
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Known secondary structure (DSSP)


TTSS
SSSTSS

SS
T



SS
TTS
 .........430.........440.........450.........460.........470.........480.........490
Sequence TPILYTIFSKWDAGCKGYSMIVAYSLKQKLVNKGGYTGRLCITPLVCVLNQIYPESYNFMTPQHMEALLQ
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Known secondary structure (DSSP)

SS

SSTTT


S









TTTS


TTT
 .........500.........510.........520.........530.........540.........550.........560
Sequence SLVIVLLGFKSFLSEELGSEVLNLLTNKQYELLSKNLRKTRELFVHGLPGSGKTILALRIMEKIRNVFHC
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Known secondary structure (DSSP)
SSSTTTSS



S
TTT
S



STTT

 .........570.........580.........590.........600.........610.........620.........630
Sequence EPANILYICENQPLKKLVSFSKKNICQPVTRKTFMKNNFEHIQHIIIDDAQNFRTEDGDWYGKAKFITQT
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Known secondary structure (DSSP)
GGG


SSTT




TS

SS


GGG

TTT

T
 .........640...
Sequence ARDGPGVLWIFLD
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Known secondary structure (DSSP)
SSS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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