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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7pp6D_

Fold library idPDB HeaderMoleculeTitle
c7pp6D_3.40PDB header: antimicrobial proteinChain: D: PDB Molecule: mucin-2;


Added to library: Sat Feb 19 09:01:44 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NVCSTWGNFHYKTFDGDVFRFPGLCDYNFASDCRGSYKEFAVHLKRGPGQAEAPAGVESILLTIKDDTIY
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Known secondary structure (DSSP)
TTTTT



S
BTTSS



S


SS


TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence LTRHLAVLNGAVVSTPHYSPGLLIEKSDAYTKVYSRAGLTLMWNREDALMLELDTKFRNHTCGLCGDYNG
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Known secondary structure (DSSP)
SS
TT

SSB

TT

SSTTTSSS

GGGTTTB
STT

SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence LQSYSEFLSDGVLFSPLEFGNMQKINQPDVVCEDPEEEVAPASCSEHRAECERLLTAEAFADCQDLVPLE
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Known secondary structure (DSSP)
SSSSSSBSSSSB

TB


TT















TTS
GGGGGGTTTS
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence PYLRACQQDRCRCPGGDTCVCSTVAEFSRQCSHAGGRPGNWRTATLCPKTCPGNLVYLESGSPCMDTCSH
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Known secondary structure (DSSP) S
SS
SSSTTT







TTSS



STT

S



SSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence LEVSSLCEEHRMDGCFCPEGTVYDDIGDSGCVPVSQCHCRLHGHLYTPGQEITNDCEQCVCNAGRWVCKD
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Known secondary structure (DSSP)
SGGGG

S



SS

B

SSS
SB

GGG

SSS

TT

SS
SSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence LPCPGTCALEGGSHITTFDGKTYTFHGDCYYVLAKGDHNDSYALLGELAPCGSTDKQTCLKTVVLLADKK
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Known secondary structure (DSSP)



TTTTT




SSSSS

SSSTTSTTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence KNVVVFKSDGSVLLNELQVNLPHVTASFSVFRPSSYHIMVSMAIGVRLQVQLAPVMQLFVTLDQASQGQV
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Known secondary structure (DSSP) TTTTT

SS
SS
SSSSTTT
SSS

GGGTT
 .........500.........510.........520.........530.........540.........550.........560
Sequence QGLCGNFNGLEGDDFKTASGLVEATGAGFANTWKAQSSCHDKLDWLDDPCSLNIESANYAEHWCSLLKKT
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Known secondary structure (DSSP) TT


SS
SSSTTB
TTSSB
SSGGGBS
TT










GGGT
T
 .........570.........580.........590.........600.........610.........620.........630
Sequence ETPFGRCHSAVDPAEYYKRCKYDTCNCQNNEDCLCAALSSYARACTAKGVMLWGWREHVCNKDVGSCPNS
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Known secondary structure (DSSP) TSTTGGGTTTT
TSSSTTT


TT

SSSS
SSTT
S
SS
 .........640.........650.........660.........670.........680.........690.........700
Sequence QVFLYNLTTCQQTCRSLSEADSHCLEGFAPVDGCGCPDHTFLDEKGRCVPLAKCSCYGLYLEAGDVVRCV
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Known secondary structure (DSSP)

STT

SSSS

TT




SSS


SSSS


GGG

B



B
TT
B


B
 .........710.........720.........730.........740.........750.........760.........770
Sequence CRDGRLHCRALSCQTLAAGYYHVCPDGLMDDGRGGCVVEKECPCVHNNDLYSSGAKIKVDCNTCTCKRGR
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Known secondary structure (DSSP) B
SSSB





SSSTTT






SSSB

SSSS
B
STT

TT
TT

TTSSSS
 .........780.........790.........800.........810.........820.........830.........840
Sequence WVCTQAVCHGTCSIYGSGHYITFDGKYYDFDGHCSYVAVQDYCGLGSFSIITENVPCGTTGVTCSKAIKI
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Known secondary structure (DSSP)





TTT
TTS




SS






SSSS
 .........850.........860.........870.........880.........890.........900.........910
Sequence FMGRTELKLEDKHRVVIQRDEGHHVAYTTREVGQYLVVESSTGIIVIWDKRTTVFIKLAPSYKGTVCGLC
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Known secondary structure (DSSP) TTTTS

SS



TTTTT
SSS

GGGTT

BSTT
 .........920.........930.........940.........950.........960.........970.........980
Sequence GNFDHRSNNDFTTRDHMVVSSELDFGNSWKEAPTCPDVSTNPEPCSLNPHRRSWAEKQCSILKSSVFSIC
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Known secondary structure (DSSP)


SS
SSS

B
TTS
B
S
TTBSSTTS








GGGGGGGGSGGGTTT
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence HSKVDPKPFYEACVHDSCSCDTGGDCECFCSAVASYAQECTKEGACVFWRTPDLCPIFCDYYNPPHECEW
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Known secondary structure (DSSP) TTTS

TT

SS
TTT





BTTBS



GGGS
SS


 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence HYEPCGNRSFETCRTINGIHSNISVSYLEGCYPRCPKDRPIYEEDLKKCVTADKCGCYVEDTHYPPGASV
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Known secondary structure (DSSP) TT





BTTGGGT


SS

TT




SSS
TTTT
SSSS



SS



SSS
 .........1130.........1140........
Sequence PTEETCKSCVCTNSSQVVCRPEEGFCYW
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Known secondary structure (DSSP)

SSSS
TTS








Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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