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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7pogA_

Fold library idPDB HeaderMoleculeTitle
c7pogA_2.83PDB header: toxinChain: A: PDB Molecule: toxin a;


Added to library: Sat Dec 11 09:37:02 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SLISKEELIKLAYSIRPRENEYKTILTNLDEYNKLTTNNNENKYLQLKKLNESIDVFMNKYKNSSRNRAL
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Known secondary structure (DSSP)



STTSTTTS

SS


S

SSS
TT
T
 .........80.........90.........100.........110.........120.........130.........140
Sequence SNLKKDILKEVILIKNSNTSPVEKNLHFVWIGGEVSDIALEYIKQWADINAEYNIKLWYDSEAFLVNTLK
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Known secondary structure (DSSP) TTTTTSS





S

SS


T
SSBTTBSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence KAIVESSTTEALQLLEEEIQNPQFDNMKFYKKRMEFIYDRQKRFINYYKSQINKPTVPTIDDIIKSHLVS
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Known secondary structure (DSSP) TTSSS

SSSS


 .........220.........230.........240.........250.........260.........270.........280
Sequence EYNRDETLLESYRTNSLRKINSNHGIDIRANSLFTEQELLNIYSQELLNRGNLAAASDIVRLLALKNFGG
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Known secondary structure (DSSP)


TTSTTSTT

STTT

S
 .........290.........300.........310.........320.........330.........340.........350
Sequence VYLDVDMLPGIHSDLFKTIPRPSSIGLDRWEMIKLEAIMKYKKYINNYTSENFDKLDQQLKDNFKLIIES
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Known secondary structure (DSSP)
TT



TTTT
S



SSS
S

STT


TTTTTS
T
 .........360.........370.........380.........390.........400.........410.........420
Sequence KSEKSEIFSKLENLNVSDLEIKIAFALGSVINQALISKQGSYLTNLVIEQVKNRYQFLNQHLNPAIESDN
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Known secondary structure (DSSP) S
SS








TT

TT
TT
S

 .........430.........440.........450.........460.........470.........480.........490
Sequence NFTDTTKIFHDSLFNSATAENSMFLTKIAPYLQVGFMPEARSTISLSGPGAYASAYYDFINLQENTIEKT
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Known secondary structure (DSSP)
T

STTTTGGGTTTSTT


TST

S
SS

 .........500.........510.........520.........530.........540.........550.........560
Sequence LKASDLIEFKFPENNLSQLTEQEINSLWSFDQASAKYQFEKYVRDYTGGSLSEDNGVDFNKNTALDKNYL
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Known secondary structure (DSSP)

GGGB

GGG
S
T


SSS
S


GGGTT








 .........570.........580.........590.........600.........610.........620.........630
Sequence LNNKIPSNNVEEAGSKNYVHYIIQLQGDDISYEATCNLFSKNPKNSIIIQRNMNESAKSYFLSDDGESIL
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Known secondary structure (DSSP) TTTTT





S



B

B


SSSTT



SSGGG



TTSSS
 .........640.........650.........660.........670.........680.........690.........700
Sequence ELNKYRIPERLKNKEKVKVTFIGHGKDEFNTSEFARLSVDSLSNEISSFLDTIKLDISPKNVEVNLLGCN
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Known secondary structure (DSSP)
STT


SSTTS



B

B
SSTT
STTTTT


SSTT
 .........710.........720.........730.........740.........750.........760.........770
Sequence MFSYDFNVEETYPGKLLLSIMDKITSTLPDVNKDSITIGANQYEVRINSEGRKELLAHSGKWINKEEAIM
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Known secondary structure (DSSP)



SS
GGGSTTSTT

GGG

S

TTS


TTSS
B

 .........780.........790.........800.........810.........820.........830.........840
Sequence SDLSSKEYIFFDSIDNKLKAKSKNIPGLASISEDIKTLLLDASVSPDTKFILNNLKLNIESSIGDYIYYE
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Known secondary structure (DSSP) S


TTTT



SSSS
TT
 .........850.........860.........870.........880.........890.........900.........910
Sequence KLEPVKNIIHNSIDDLIDEFNLLENVSDELYELKKLNNLDEKYLISFEDISKNNSTYSVRFINKSNGESV
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Known secondary structure (DSSP)





STTS

SSS

TTTS
SSS

 .........920.........930.........940.........950.........960.........970.........980
Sequence YVETEKEIFSKYSEHITKEISTIKNSIITDVNGNLLDNIQLDHTSQVNTLNAAFFIQSLIDYSSNKDVLN
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Known secondary structure (DSSP)

ST

B
SSS

B
B


ST


TT
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence DLSTSVKVQLYAQLFSTGLNTIYDSIQLVNLISNAVNDTINVLPTITEGIPIVSTILDGINLGAAIKELL
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Known secondary structure (DSSP)
SS
GGG


S



S

SSSS

S


TT
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence DEHDPLLKKELEAKVGVLAINMSLSIAATVASIVGIGAEVTIFLLPIAGISAGIPSLVNNELILHDKATS
Predicted secondary structure



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Known secondary structure (DSSP)

TT




T


B
TTSSS


TTSB
S
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence VVNYFNHLSESKEYGPLKTEDDKILVPIDDLVISEIDFNNNSIKLGTCNILAMEGGSGHTVTGNIDHFFS
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Known secondary structure (DSSP) TTGGGTT
STTT
TT

TTTT




SS
TT
SS
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence SPYISSHIPSLSVYSAIGIKTENLDFSKKIMMLPNAPSRVFWWETGAVPGLRSLENNGTKLLDSIRDLYP
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Known secondary structure (DSSP)

SSS

STTTS



SS



SS







S
TT

SST
 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence GKFYWRFYAFFDYAITTLKPVYEDTNTKIKLDKDTRNFIMPTITTDEIRNKLSYSFDGAGGTYSLLLSSY
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Known secondary structure (DSSP) TS

SSSS


SS






TT

SS

SS
 .........1340.........1350.........1360.........1370.........1380.........1390.........1400
Sequence PISMNINLSKDDLWIFNIDNEVREISIENGTIKKGNLIEDVLSKIDINKNKLIIGNQTIDFSGDIDNKDR
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Known secondary structure (DSSP)



SS

TT
TTTTSS

SS
SS

SSTT
TT
 .........1410.........1420.........1430.........1440.........1450.........1460.........1470
Sequence YIFLTCELDDKISLIIEINLVAKSYSLLLSGDKNYLISNLSNTIEKINTLGLDSKNIAYNYTDESNNKYF
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Known secondary structure (DSSP)

SSSS
TTTTS
TT


S
TTS
 .........1480.........1490.........1500.........1510.........1520.........1530.........1540
Sequence GAISKTSQKSIIHYKKDSKNILEFYNGSTLEFNSKDFIAEDINVFMKDDINTITGKYYVDNNTDKSIDFS
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Known secondary structure (DSSP) SSTTSSS
TTS



TTGGG
SSS
 .........1550.........1560.........1570.........1580.........1590.........1600.........1610
Sequence ISLVSKNQVKVNGLYLNESVYSSYLDFVKNSDGHHNTSNFMNLFLNNISFWKLFGFENINFVIDKYFTLV
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Known secondary structure (DSSP)
STT
SSS
SSBTGGGGTS
S

 .........1620.........1630.........1640.........1650.........1660.........1670.........1680
Sequence GKTNLGYVEFICDNNKNIDIYFGEWKTSSSKSTIFSGNGRNVVVEPIYNPDTGEDISTSLDFSYEPLYGI
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Known secondary structure (DSSP)
SS
TTSB
SS
STT
S


SSTTS



SSTTTTG
 .........1690.........1700.........1710.........1720.........1730.........1740.........1750
Sequence DRYINKVLIAPDLYTSLININTNYYSNEYYPEIIVLNPNTFHKKVNINLDSSSFEYKWSTEGSDFILVRY
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Known secondary structure (DSSP) GGT




TT





S
S







S
S
SS
SSSTT
 .........1760.........1770.........1780.........1790.........1800.........1810.........1820
Sequence LEESNKKILQKIRIKGILSNTQSFNKMSIDFKDIKKLSLGYIMSNFKSFNSENELDRDHLGFKIIDNKTY
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Known secondary structure (DSSP) SSS
TTTTS
TT
SSS
SS
B




GGGS

SS

TT

 .........1830.........1840.........1850.........1860.........1870.........1880.........1890
Sequence YYDEDSKLVKGLININNSLFYFDPIESNLVTGWQTINGKKYYFDINTGAASTSYKIINGKHFYFNNNGVM
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Known secondary structure (DSSP) B
TTSSB

TT
TTT

B

TT
TTT

B

S
TT
B
TT
BB
 .........1900.........1910.........1920.........1930.........1940.........1950.........1960
Sequence QLGVFKGPDGFEYFAPANTQNNNIEGQAIVYQSKFLTLNGKKYYFDNDSKAVTGWRIINNEKYYFNPNNA
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Known secondary structure (DSSP)

TT
TTSSTT

TT



SSTTB
TTS

SSSSSB
TTT
 .........1970.........1980.........1990.........2000.........2010.........2020.........2030
Sequence IAAVGLQVIDNNKYYFNPDTAIISKGWQTVNGSRYYFDTDTAIAFNGYKTIDGKHFYFDSDCVVKIGVFS
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Known secondary structure (DSSP)
B

TT
TTT

B

TT
SSS

B

TTTT
SS



 .........2040.........2050.........2060.........2070.........2080.........2090.........2100
Sequence GSNGFEYFAPANTYNNNIEGQAIVYQSKFLTLNGKKYYFDNNSKAVTGWQTIDSKKYYFNTNTAEAATGW
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Known secondary structure (DSSP)
TT

S
S
TTTS

TT


S


BSSS
B

B
TTS
B




TTTT

SSS




 .........2110.........2120.........2130.........2140.........2150.........2160.........2170
Sequence QTIDGKKYYFNTNTAEAATGWQTIDGKKYYFNTNTSIASTGYTIINGKYFYFNTDGIMQIGVFKVPNGFE
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Known secondary structure (DSSP)
TTSS

SSSS



STT

SSSS



SSTT
B
SS

B

STT
 .........2180.........2190.........2200.........2210.........2220.........2230.........2240
Sequence YFAPANTHNNNIEGQAILYQNKFLTLNGKKYYFGSDSKAITGWQTIDGKKYYFNPNNAIAATHLCTINND
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Known secondary structure (DSSP) B

TTSSTT

TT
B



SSSS

SSSBB


GGG


TTT

B

S
SSS
 .........2250.........2260.........2270.........2280.........2290.........2300.........2310
Sequence KYYFSYDGILQNGYITIERNNFYFDANNESKMVTGVFKGPNGFEYFAPANTHNNNIEGQAIVYQNKFLTL
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Known secondary structure (DSSP)
B
SS

B

TTSTTSS

S

TTS

TTSSSS

TT



S


 .........2320.........2330.........2340.........2350.........2360.........2370.........2380
Sequence NGKKYYFDNDSKAVTGWQTIDSKKYYFNLNTAVAVTGWQTIDGEKYYFNLNTAEAATGWQTIDGKRYYFN
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Known secondary structure (DSSP) SSS
B
SSS
B

S
SSS

B
SSS

B

BS


SS

TTB
SSS

S


S


SSS




 ..
Sequence TN
Predicted secondary structure

SS confidence

Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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