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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7pnmA_

Fold library idPDB HeaderMoleculeTitle
c7pnmA_3.70PDB header: viral proteinChain: A: PDB Molecule: spike glycoprotein;


Added to library: 3.70
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VIGDLKCTSDNINDKDTGPPPISTDTVDVTNGLGTYYVLDRVYLNTTLFLNGYYPTSGSTYRNMALKGSV
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Known secondary structure (DSSP)


SB
S

SS




S

B
SS



TT
TT
B

TT



S

TT


BB


SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence LLSRLWFKPPFLSDFINGIFAKVKNTKVIKDRVMYSEFPAITIGSTFVNTSYSVVVQPRTINKLQGLLEV
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Known secondary structure (DSSP)
GGGSSTTS
SS
TT


SS
STTS
B


 .........150.........160.........170.........180.........190.........200.........210
Sequence SVCQYNMCEYPQTICHPNLGNHRKELWHLDTGVVSCLYKRNFTYDVNADYLYFHFYQEGGTFYAYFTDTG
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Known secondary structure (DSSP) B


BBSS



TTT

SS


SB

SS



S


TT
STTSSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence VVTKFLFNVYLGMALSHYYVMPLTCNSKLTLEYWVTPLTSRQYLLAFNQDGIIFNAVDCMSDFMSEIKCK
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Known secondary structure (DSSP) SSB
SS





SS




TTS
TTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence TQSIAPPTGVYELNGYTVQPIADVYRRKPNLPNCNIEAWLNDKSVPSPLNWERKTFSNCNFNMSSLMSFI
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Known secondary structure (DSSP) T
SS

S








SS

B

T
S

B
STT
S


 .........360.........370.........380.........390.........400.........410.........420
Sequence QADSFTCNNIDAAKIYGMCFSSITIDKFAIPNGRKVDLQLGNLGYLQSFNYRIDTTATSCQLYYNLPAAN
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Known secondary structure (DSSP) SS
TTS
SS

BS

TT
GGGGSTT


T




SS
STT
 .........430.........440.........450.........460.........470.......
Sequence VSVSRFNPSTWNKRFGFIEDSVFKPRPAGVLTNHDVVYAQHCFKAPKNFCc7pnmA_
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Known secondary structure (DSSP)


B




TT

S
BTTTSSB
SSS


TT



B




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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